Gene VEA_001072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001072 
Symbol 
ID8559385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp1217449 
End bp1218213 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content50% 
IMG OID646408743 
Productferrichrome ABC transporter (ATP binding subunit) PvuE 
Protein accessionYP_003288222 
Protein GI262396369 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTACGAA CGCAGAATTT ATCCGTCGCG TACGGCAAAC AGACCATTAT TCCGGATCTC 
TCTTTGTCGA TTCCTCAAGG TAAAATTACC GCGCTTGTTG GCCCAAATGG TTGCGGTAAG
TCGACACTAT TAAAAACCTT GGTACGCATC AATAAACCAG CGTCCGGCCA AGTGTTGTAT
GACGACAAAC CACTAAGCAG CTACGGTGAT AAACGCTTGG CACGCTCGTT GTCTTTGCTG
CCGCAGATTC TTGTCAGTCC TGAAGGTATT ACAGTCAGAA AACTGGTCGA ATATGGCCGC
TCGCCTTATC TCTCTCATTG GGGTCGGTTA AGTCAACAAG ACAAAGCCTT GGTCGAGCAA
GCAATGCAAG ATACTGGCGT GATTGAGTTT GCTGACCAGC CAGTTGAATC GTTGTCTGGC
GGTCAAAGGC AAAGGGCGTG GATTGCGATG GTAATGGCGC AAGATACCGA CGTAGTGATG
CTCGACGAGC CCACCACTTA TCTGGATCTC TCCCATCAAG TTGAGCTGAT GAAGCTAATG
AGGCAGATGA ACGACAAAGG CAAAACCGTG GTCGTAGTGC TGCACGATCT AAACCAAGCG
TGCCGTTACT GCGATCATTT GGTGGTGTTG GAAAAAGGTC AGCTAGTTAC GCAGGGAACG
CCGCAAGAGG TACTGACAGA AGGCATGTTG GCATCGGTGT TTGATTTACA AGCCAGAGTA
TTTAACGACC CAATCTCGGG CACGCCGATG TGCGTGGCGG TGTAA
 
Protein sequence
MLRTQNLSVA YGKQTIIPDL SLSIPQGKIT ALVGPNGCGK STLLKTLVRI NKPASGQVLY 
DDKPLSSYGD KRLARSLSLL PQILVSPEGI TVRKLVEYGR SPYLSHWGRL SQQDKALVEQ
AMQDTGVIEF ADQPVESLSG GQRQRAWIAM VMAQDTDVVM LDEPTTYLDL SHQVELMKLM
RQMNDKGKTV VVVLHDLNQA CRYCDHLVVL EKGQLVTQGT PQEVLTEGML ASVFDLQARV
FNDPISGTPM CVAV