Gene VEA_001062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001062 
Symbol 
ID8559375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp1202624 
End bp1203826 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content50% 
IMG OID646408733 
Productvibrioferrin decarboxylase protein PvsE 
Protein accessionYP_003288212 
Protein GI262396359 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0019] Diaminopimelate decarboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAATT CACTCTCCCT ACCGACACGC GTTAGCCAGC AAGTTCACAC GCTCGCACAG 
CAGCAAAATC AACCCTTGTG CGCGTACGTG TATGACCTAA ACGCCTTAGA AGAACACATC
AAACAACTGC GTCACGTTTT GCCGAGAAAT GTCGAGCTAT TTTACGCAGC CAAAGCCAAT
CCATCGGGCC CGATTCTCAA AACGCTCGCG CCGTATGTCG ATGGTTTTGA AGCGGCGTCT
GGCGGGGAGC TGGCACACCT CCACCAGCAA CAACTCGATA AGCCATTGAT CTTCGGTGGC
CCAGGAAAAA TGCCAAGTGA ATTGCAACAA GCGATTGAGC TTGATGTTGA TGCAATTCAT
GTCGAAAGCC TCACCGAGCT GCAACGCATT GGTGCACTAA CCGAGCGCCT CAACCGCCCT
GCTTCGATCT TTTTGCGTAT GAACATCGAT ATTGGCGACA TCACGCTCAG CAAGTTGGCG
ATGGGCGGCA AGCCAACTCC TTTTGGTTTG GACGAGTCCG AACTGAGTAA TGCTTTGATG
TTGCTGCGCG ATTTCCCGCA AGTGTCACTC AAAGGCTTCC ATTTTCACTT GATGTCGCAT
CAGCTCGATG TTGAACGTCA CTTAGCGTTA ATGCAGCGCT ATTTCCAAGT CGTGAAGGCG
TGGCAACAAG AGTTTGAACT CGGTGAGCTG ATGATCAACT TGGGTGGAGG CATGGGGATT
AACTACCAAA ACCCTGAGCA ACACTTTCCG TGGATGGAGT TTTGCGACAA GTTGGAATTC
CTCATCGCCA AAGAGCAAGT GCAAGACTGG ACACTGCGTT TTGAATGCGG ACGTTTCATC
ACGGCGGCAT GCGGTTACTA CGTAATGGAA GTGCTGGATA TTAAGCAAAA TCTTGGCGAA
AACTTTGTCA TCGCGCGCGG AGGAACTCAC CACTTCCGCA CACCAGCAGC GCAGAGCCAT
GATCATCCAT TCGTCATCCT GAAAAGCGAG CAACACCATG AGATTTCTCA TCCAATTCAG
CATGCACAAG CGACCTTTGC CGGCCAGCTT TGTACGCCCA AAGATGTGCT GGCACGTAAT
CAACACGTCG CCCACGTCGA TATTGGTGAT TACGTTGTGT TTACCTTAGC GGGCGCGTAT
GCGTGGAACA TCTCCCATCA AAACTTCTTG ATGCATGAAC CGCCGATCTT CCACTATTTT
TAA
 
Protein sequence
MSNSLSLPTR VSQQVHTLAQ QQNQPLCAYV YDLNALEEHI KQLRHVLPRN VELFYAAKAN 
PSGPILKTLA PYVDGFEAAS GGELAHLHQQ QLDKPLIFGG PGKMPSELQQ AIELDVDAIH
VESLTELQRI GALTERLNRP ASIFLRMNID IGDITLSKLA MGGKPTPFGL DESELSNALM
LLRDFPQVSL KGFHFHLMSH QLDVERHLAL MQRYFQVVKA WQQEFELGEL MINLGGGMGI
NYQNPEQHFP WMEFCDKLEF LIAKEQVQDW TLRFECGRFI TAACGYYVME VLDIKQNLGE
NFVIARGGTH HFRTPAAQSH DHPFVILKSE QHHEISHPIQ HAQATFAGQL CTPKDVLARN
QHVAHVDIGD YVVFTLAGAY AWNISHQNFL MHEPPIFHYF