Gene VEA_001056 details

Gene Information

• Locus tag: VEA_001056
• ID: 8559369
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013457
• Strand: -
• Start bp: 1194707
• End bp: 1196698
• Gene Length: 1992 bp
• Protein Length: 663 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 646408727
• Product: peptidase U32
• Protein accession: YP_003288206
• Protein GI: 262396353
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0826] Collagenase and related proteases

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACACGCG ATCAATTTGA GTTATTAGCA CCCGGCGGTG ATTTAGATTC CATCAAAGCC 
GCCATTGCCG CTGGCGCCGA TGCAATTTAC TGTGGGCTCG ACCGCTTCAA TGCTCGTAAC 
CGAGCGACCA ACCTCACCTT AGATAACTTA AATGGCGTGT TAACGTTGGC CCATCAGCAC 
AGCTGTAAGA TTTTCCTAAC GTTGAATGTG CTGATTTTAG AAAGTGAAAT TCCAGCGATT 
GTTCGCTTAC TCAGCCAACT GAACACCACC AAAATCGATG GCGTGATCGT GCAAGATCTC 
GGTCTGGCCT ACATTCTCAA ACATCACTTC CCCGATTTGG ATGTGCACGC TTCAACGCAA 
CTGAACACGC ATAACGAAGG CCAGATCCTC TTTCTCAACC AGCTCACCGC AAGCCGAGTA 
AACTTATCTC GCGAACTTAA CATCGATGAA ATAAAACATC TGGCGCAATT TGGTCGCGAG 
CACAACGTAA TGATGGAAGT GTTTGTCCAC GGCTCATACT GCATCGGATT CTCCGGAATT 
TGCTACATCA GTTCCGCTCG CAATGGCGCA TCAGGAAACC GTGGACGCTG CAGTCAACCT 
TGTCGCGAAC AGTACGAAAC GACCAAAACG GGCAACAACT ACCCACTCAA TATGAAAGAC 
AATTCCGCCT TTGGGGACTT GAAAGCGCTT GCCGATGCTG GCGTGTATTC ATTAAAAGTG 
GAAGGACGAA TCAAGAAGTC GCACTATGTC TATACCGTGG TCGACAATTG GCGTCAGCAA 
ATCGATCGCT TGTGCGAAGG TTTGGAACTC TCTGAAGATA CCACAGAGTT GTACACGGTG 
TTCAACCGTG ATTTCTCCAA CGCATTTTTG CAAGGTGATT TCGGCAAGGC GATGTACATC 
GACAACCCGC GCGACCACGC TGTAAAGCAT TTTTCGAAGG TTTATCAATG CCAGTCTGCT 
GATGATGTGC AAGCGGTGAA AAAGAAACTC TACGACGACA AAACCGCGAT CATTGAGAAA 
GTGGCTGAGC AAACTAAGTC GTTCGATGTC GCTTCGACAC AAGTATCCGG CAGCAGCTTG 
AAAGGGTCGA TTGATGTGCC AACTCTGCCA GCGTTACCTC AACCAGAACC TCGCCAAGGT 
GCGCCAAAAT TATCGGTTCT GATCTCGTCA GCACAAGAAG CCATGCTGTG CGAATACCAC 
GACATTGATG TTTACTATCA ATTGCCAATG GGATTGTCTG GCGAACTGAG CGCGATGATT 
GAGTTGTTCC AAGCCAACCC AATGCTCAAA CCTTGGTTCC CAGCCATTTT GATTGGCGAA 
GACTACCACG CCGCGCGCGT ATTTTTGGAA ACCATCCAAC CTGAGTTGTT GATCACCAAC 
AACTCAGGCG TCGGCATGAT CGCAAAAGAG CTCGGCTTAG GCTGGGTGGC AGGCCCACAA 
ATGAACACGG TGAACTCATA TGCGTTTAAA TGCCTTCAAG ACGAGTTCGC GGCAAGTGGC 
GCATTTGTTT CTAACGAGCT GAATATGAAG CAGATGCGCC ATATCAAGCG TCCGAAAAAC 
ATGCGCAGCT TCTACAGCAT TTATCATCCA AATACCCTAC TCACGAGCCG CCAATGTTTG 
TTCCAACAAA CCGAAGGATG CCGTAAGGTG AAGATCAACA AAGGTTGTTT GAAACGCTGT 
GATAAACGCA CGTCTATCAT CAACTTAAAA GACAATCCTT ACGTGGTGCA AAAACAAAAA 
GGCAGCCACA ATTCAATCTA CAGCGAGCAC AACGTCTTAA ACCTGCAAGT ACTGCACGAT 
CTGCCGCAAT TGTTTACCGA TGTGTTGATC GATCTGCGTG ATATCCAGAC CGAAACGACA 
GTCTCAGCAA GCAAACCTGA GTTGATTGAC GCGTTCTTAG CTCTACTTGA AGAACACAGC 
GAACAAACCG TCCAAACGCT GAATGCCATG ATTCAACCAA CAGCCAACGC GCAGTATTTA 
AAGGGGTTGT AG 

 

Protein sequence

MTRDQFELLA PGGDLDSIKA AIAAGADAIY CGLDRFNARN RATNLTLDNL NGVLTLAHQH 
SCKIFLTLNV LILESEIPAI VRLLSQLNTT KIDGVIVQDL GLAYILKHHF PDLDVHASTQ 
LNTHNEGQIL FLNQLTASRV NLSRELNIDE IKHLAQFGRE HNVMMEVFVH GSYCIGFSGI 
CYISSARNGA SGNRGRCSQP CREQYETTKT GNNYPLNMKD NSAFGDLKAL ADAGVYSLKV 
EGRIKKSHYV YTVVDNWRQQ IDRLCEGLEL SEDTTELYTV FNRDFSNAFL QGDFGKAMYI 
DNPRDHAVKH FSKVYQCQSA DDVQAVKKKL YDDKTAIIEK VAEQTKSFDV ASTQVSGSSL 
KGSIDVPTLP ALPQPEPRQG APKLSVLISS AQEAMLCEYH DIDVYYQLPM GLSGELSAMI 
ELFQANPMLK PWFPAILIGE DYHAARVFLE TIQPELLITN NSGVGMIAKE LGLGWVAGPQ 
MNTVNSYAFK CLQDEFAASG AFVSNELNMK QMRHIKRPKN MRSFYSIYHP NTLLTSRQCL 
FQQTEGCRKV KINKGCLKRC DKRTSIINLK DNPYVVQKQK GSHNSIYSEH NVLNLQVLHD 
LPQLFTDVLI DLRDIQTETT VSASKPELID AFLALLEEHS EQTVQTLNAM IQPTANAQYL 
KGL