Gene VEA_001053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001053 
Symbol 
ID8559366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp1192014 
End bp1193015 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content43% 
IMG OID646408724 
Productglycosyltransferase 
Protein accessionYP_003288203 
Protein GI262396350 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.110978 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTAA TTGTTCAAAT TCCGTGCTTT AACGAAGCGG ACAATATTGC TGATGTTATT 
CGCTCAATAC CAAAGCGCGT TGATGGTATC GCTAAGATAG AGATTCTAAT CATCGATGAT
GGTTCTACGG ATGGTACTTC AGAAGTCGCA CGCAAGTGTG GTGTTGAGCA CATTATTACT
AACCAGGGCA ATAAGGGGCT TGCTTACTCA TTTCGAAGAG GGATTGAGGA GTGCCTTCGT
CTTCATGCTG ATATCATTGT GAACACCGAT GGCGATAATC AATATAATGG GGCCGATATT
CCGCACTTGG TTAAGCCTAT TATCGAGCAC AAAGCAGAAA TTGTTGTTGG TGACCGAGGA
GGGTATAGCA ATACACATTT CTCTGTATTT AAACGATGTT TACAAGTGTC GGGGAGCTTT
ATTATTGCCA AAGCGACGGG ATTGGATGTT AAAGATGCTG TGAGTGGTTT TCGCGCAATA
TCGAGAAGTG CGGCACAACA ACTTAATATC GTATCGGATT TTAGCTACAC AATAGAAATG
TTGATTCAAG CAAGTGCAAA AAGGATTGGT GTGGTTTCGG TGCCAATCCG AACTAATGAA
AAAACGCGAG AGTCCCGTCT GTTTAAGAGC ATTCCGCAGT TTCTAAAAAT GTCGCTCTCT
ACCTTGGTCA GGGTTTATAC CATGTACCGA CCTCTGCAAG TGTTTTTGTT TATTGGCTCT
GTGGCGATGA TTTGCGGTGT GATTCCCATT ATGCGATTCC TGTATTTCTT TTTAAATGGA
GCGGGAGATG GCCATATTCA GTCATTGGTC TTGGGGTCAA CGCTACTTAT CTTGGGTTTC
ATCACTTTAT TGATGGGGTT GGTGGCCGAT CTAATAGGGT TCAATCGAAA GCTGACCGAA
AAAGTATTGC ACCGAATTGA GGTATTGGAA GAAAAGCTGG AGCATCAGGA AAAGTTGCCC
ACTTATCAGT TTGAAACCAA GCGAAAACGA TCTGGAGAGT AA
 
Protein sequence
MKLIVQIPCF NEADNIADVI RSIPKRVDGI AKIEILIIDD GSTDGTSEVA RKCGVEHIIT 
NQGNKGLAYS FRRGIEECLR LHADIIVNTD GDNQYNGADI PHLVKPIIEH KAEIVVGDRG
GYSNTHFSVF KRCLQVSGSF IIAKATGLDV KDAVSGFRAI SRSAAQQLNI VSDFSYTIEM
LIQASAKRIG VVSVPIRTNE KTRESRLFKS IPQFLKMSLS TLVRVYTMYR PLQVFLFIGS
VAMICGVIPI MRFLYFFLNG AGDGHIQSLV LGSTLLILGF ITLLMGLVAD LIGFNRKLTE
KVLHRIEVLE EKLEHQEKLP TYQFETKRKR SGE