| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001047 |
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| Symbol | |
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| ID | 8559360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 1184043 |
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| End bp | 1184942 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646408718 |
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| Product | transcriptional regulator AraC family |
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| Protein accession | YP_003288197 |
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| Protein GI | 262396344 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGTCG ATTATCACCA ACGACTCGTT CCTGTCATTC GCTATCTGGA ACAGCACTTT
AACGCTCCTC TCAATTTGCT CGAAGTGGCA GCGCTAGCCA ACCTCTCTCC CTATCATTTT
CACCGTACCT TCAAGGCGGT ACAAGGCGAA ACATTAGCCG ACTTCATCCG ACGTTTACGG
CTAGAGGCGG CAGCAGACGA CCTTTTCAAA TCAAAGCAAC CAGTGCTGAA CATCGCGTTA
GAGTACGGTT TTTCTAGTTC GCAAAGCCTA GCTAAGGCGT TTAAGCAGCA TTATGGCGTA
ACACCAACCG CCTTTCGCGA CTGTAAAAAC TACCAGCAAT TTTCTGAGCT CGCGCGAAAC
AGCAAGATTG GACACGCACT GCGCAAGAAT GGAAACGAAC GAGCCCTAAG CGATTCATAT
ACTGACTCTG AACTCACAAC ATGGAGCAAC AATATGGAAA CGCAAAACTT TGATAAAGCA
AAATTGGCTT ACATTCGCGT TAACGGCCCT TACGGCAAAG GCTATGAAGA ACCATCAGGT
CGCTTGTATC AATGGGCAGG AATGAAAGGT TTGGCGGGCA ATACCTGTAT CTTCATTTAT
CACGATAACC CAGAAATCAC GCCAGACGAG AAGTGTCGTA CTGATATCTG TCTAATGGTG
CCAGAAGATA CCGAAGTACC AAAAGGCATT GAGCTGCAAG ACTTCCCCGG CGGTCAATAT
GCGGTGATGC GCCAGCAAAT TACCGAATTC AGCCAATACC CTAAAGCATG GGATGATTTG
ATGAGCAAAG TGGTTGAATC TGGTATTGAA AACGACTGTC GACCTTGCTT CGAACTTTAT
CATAGCTACG ATCCACAAAC GCACCATGCA GACGTCAGCT TCTGCACTGC CATCAAATAA
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| Protein sequence | MRVDYHQRLV PVIRYLEQHF NAPLNLLEVA ALANLSPYHF HRTFKAVQGE TLADFIRRLR
LEAAADDLFK SKQPVLNIAL EYGFSSSQSL AKAFKQHYGV TPTAFRDCKN YQQFSELARN
SKIGHALRKN GNERALSDSY TDSELTTWSN NMETQNFDKA KLAYIRVNGP YGKGYEEPSG
RLYQWAGMKG LAGNTCIFIY HDNPEITPDE KCRTDICLMV PEDTEVPKGI ELQDFPGGQY
AVMRQQITEF SQYPKAWDDL MSKVVESGIE NDCRPCFELY HSYDPQTHHA DVSFCTAIK
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