Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001043 |
Symbol | |
ID | 8559356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 1180378 |
End bp | 1181946 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 646408714 |
Product | alkyl hydroperoxide reductase protein F |
Protein accession | YP_003288193 |
Protein GI | 262396340 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3634] Alkyl hydroperoxide reductase, large subunit |
TIGRFAM ID | [TIGR03140] alkyl hydroperoxide reductase, F subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.30284 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGACC AAGCGATCCA ACAACAACTC AAACAATATC TGGCTAATGT AAAAGAAGAC GTTCGTCTAG TGGTTAGTCT AGATGAAAGC AAAGCATCGA ATGACATTCT GTCTCTGGCG AACCAAATCG CAGAGATGAG CGACTTTATC ACCGTTGAAC GTGACGACAA CGCAAGCGCA CGTAAACCAG TGATGACGGT GACCAACCCA GTAAAAGGCA CAGCACTTCG CTTTGCTGGC CTACCAATGG GTCACGAATT TACCTCTCTG GTATTGGCAT TGCTGCACTC TGGTGGTCAC CCAATCAAAC TAGAGCCGGA AGTGATTGAA CAAATCGCAG CGCTAGATAA AGAATTGGAT GTTGAAGTGT TCATTTCACT GTCGTGCCAA AACTGTCCAG ACGTTGTTCA AGCGTTCAAC ATGATGGCGG CGATCAACCC GAAAGTGAAA GCAACCATGA TCGACGGTGC ACTCTTCCAA GATGAAGTAA AACAACGTGA CATCATGGCA GTACCAAGCG TATTCGTGAA CGGTGAGCTA TTCGGCCAAG GTCGTATGTC TCTGACTGAA ATCCTAAACA AAGTGGATGA CGGCGCGAGC GAGAAAGCAG CCAAAGCACT GAGCGAAAAA GACCCATACG ACGTGCTAGT TGTCGGCGGT GGCCCTGGTG GTAGTGCAGC AGCACTATAC GCAGCGCGTA AAGGTATTCG CACTGGCGTT GTCGCTAAAC GCTTCGGTGG TCAGGTGATG GACACCATGG CAATCGAGAA CTTTATCTCG GTAAAACGTA CTGAAGGTCC AAAATTGGCG ACTGACCTAG CCGAGCACCT AAAAGAATAT GACGTAGACG TCGTGACTGA GCAACAAGCG CAAAAACTGA TGGGCGCAGC GCACACAGAA GATGGCTTGA TTCATATCCA ACTTGAAAGC GGCGCAACGC TGAAAAGTAA GAGTGTCATC CTAAGCCCTG GTGCACGCTG GCGTGAAATG AACGTTCCGG GCGAGCAAGA GTACCGCAAC AAAGGCGTCG CGTACTGCCC ACACTGTGAC GGCCCGTTGT TCAAAGGCAA GAAAACCGCC GTTATCGGTG GTGGTAACTC AGGCATCGAA GCAGCTATCG ACCTTGCTGG TATCGTAGAA CACGTAACGG TTCTTGAATT CGCAGACGTA CTTCGCGCAG ACCAAGTGCT TATCGACAAA GCGAGCTCAC TACCAAACGT AGACATCATC ACGATGGCGC AAACTACTGA AGTTGTGGGT GACGGTACTC GCGTAACAAG CTTGAAGTAC AAAGACCGCA ACACAGATGA AATCAAAGAG ATTGAACTGT CAGGTATCTT TGTTCAAATC GGTCTAGTAC CAAACACAGA ATGGCTAAAA GATTCAGAAG TAGCGCTTTC TGAGCGCGGC GAAATTGAAG TTGGTAGCCG TGGTGAAACC AGCCTAGAAG GTGTCTTCGC AGCGGGTGAC GCAACGACGG TTCCTTACAA ACAGATCATC ATTGCGATGG GTGAAGGTGC AAAAGCAAGC TTAGGCGCGT TTGACTACCT AATCCGTAAG CAAGGTTAA
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Protein sequence | MLDQAIQQQL KQYLANVKED VRLVVSLDES KASNDILSLA NQIAEMSDFI TVERDDNASA RKPVMTVTNP VKGTALRFAG LPMGHEFTSL VLALLHSGGH PIKLEPEVIE QIAALDKELD VEVFISLSCQ NCPDVVQAFN MMAAINPKVK ATMIDGALFQ DEVKQRDIMA VPSVFVNGEL FGQGRMSLTE ILNKVDDGAS EKAAKALSEK DPYDVLVVGG GPGGSAAALY AARKGIRTGV VAKRFGGQVM DTMAIENFIS VKRTEGPKLA TDLAEHLKEY DVDVVTEQQA QKLMGAAHTE DGLIHIQLES GATLKSKSVI LSPGARWREM NVPGEQEYRN KGVAYCPHCD GPLFKGKKTA VIGGGNSGIE AAIDLAGIVE HVTVLEFADV LRADQVLIDK ASSLPNVDII TMAQTTEVVG DGTRVTSLKY KDRNTDEIKE IELSGIFVQI GLVPNTEWLK DSEVALSERG EIEVGSRGET SLEGVFAAGD ATTVPYKQII IAMGEGAKAS LGAFDYLIRK QG
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