Gene VEA_001014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001014 
Symbol 
ID8559327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand+ 
Start bp1151907 
End bp1152542 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content46% 
IMG OID646408685 
Productpyridoxamine 5'-phosphate oxidase 
Protein accessionYP_003288164 
Protein GI262396311 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0259] Pyridoxamine-phosphate oxidase 
TIGRFAM ID[TIGR00558] pyridoxamine-phosphate oxidase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTTG CTGATATTCG TCGTGAGTAC ACCAAAGGTG GGCTACGTCG TAAAGATTTG 
AAAGCTGATC CTATTGATCA ATTTAATCTG TGGCTAGAGC AAGCAGTTGA AGCGGGTTTA 
ACGGATCCGA CTGCGATGAC AGTTGCAACG GTTGATGAAA ATGGCATGCC GTTTCAACGC 
ATTGTTCTAT TGAAAAACGT CGACAAAAAT GGCTTTGTAT TTTACACCAA CCTAGGCAGT 
CGCAAGGCCC AGCAGCTTGA GCATAACAGC AATATTAGTT TGCACTTCCC TTGGCATCCG 
TTAGAGCGCC AGGTTCATAT TACAGGTGTG GCGGAAAAGC TCACCGCCGT AGAAAATATG 
AAATACTTTA CTTCTCGTCC AAAAGAGAGC CAATTAGCCG CAATCGCGAG CAAGCAAAGT 
AGCCGTATTT CTGCTCGAGG CGTATTAGAA GGTAAGTTTT TAGAGCTAAA ACAGAAATTT 
GCGAAGGGTG AAATACCGGT TCCAACCTTC TGGGGTGGCT TTCGCGTAAA ACCACAGAGC 
ATCGAGTTTT GGCAGGGTGG TGAACATCGT CTTCATGACC GCTTTCTTTT CTCCCAACAT 
GACGGAAGTT GGGACATTGA CCGTCTAGCG CCATAA
 
Protein sequence
MELADIRREY TKGGLRRKDL KADPIDQFNL WLEQAVEAGL TDPTAMTVAT VDENGMPFQR 
IVLLKNVDKN GFVFYTNLGS RKAQQLEHNS NISLHFPWHP LERQVHITGV AEKLTAVENM 
KYFTSRPKES QLAAIASKQS SRISARGVLE GKFLELKQKF AKGEIPVPTF WGGFRVKPQS 
IEFWQGGEHR LHDRFLFSQH DGSWDIDRLA P