| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001011 |
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| Symbol | |
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| ID | 8559324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 1147134 |
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| End bp | 1148525 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646408682 |
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| Product | ABC-type protease exporter membrane fusion protein (MFP) family component PrtE/AprE |
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| Protein accession | YP_003288161 |
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| Protein GI | 262396308 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGAG ATAACTACAA CAAACTCAAC AATGAAGAGT TGGATTTTGT TGACGACAAA
ACTGCAGCAT TGCTCCTCAA CACCCCCAAC AGCGCACGTT TGATGCTCTG GGTGATGGTG
TTGTTTTTTA TTGCTGCAAT AGGCTGGGCA TCTTGGGCTG AAATCGACCA GGTCACTGTT
GGTCAGGGAA AAGTCATTCC CTCTTCACAG ATTCAAGTTG TCCAAAACTT AGAAGGTGGC
TTAGTCAAAG AAATTTTAGT CAAAGAAGGT CAATTGGTTG AAAAAGGTCA GCAGTTACTT
CTTATCGATG ACACTCGCTT TCGCTCTGAT TTTCGTGAGC GTGAACAACA AGTTGCCAAC
CTAACTGCGT CTGTGCTGCA ACTCTCAGCT TCAATCAACA GTGTTGCCGT GAATCGTGAT
TTTAAAACGG AAAACTGGCG CCAAAGCGTA GTACTCGATT ATGGAAAACT GACCTTTCCA
CCAACTTTAG AAGAAACTCA ACCGAAACTC ACTCAGCGCC AGAAAGCTGA ATACCGCGAA
GATTTAGACA ATTTACGCAA CCAACTTTCG GTGATTGACC AACAAGTTCA GCAAAAGCAG
CAGGACTTGG TAGAGATTGA AGCGCGAGTA AGGAACTTAC GTCAAAGCTA TCAATATGCG
AAGAAAGAAT TAGACATCAC CAAACCGTTG GCTGATGAAG GTGTTGTGCC TCGTATTGAA
TTACTCAAGT TACAACGCCA AGTCAACGAC ACCCGCCGCG AAATGACTTC CAGTGAGCTC
AAAATCCCGG TATTAAAGTC AGCGATTCGA GAATCCATGC TTAATCGCAT TGATGTTGCG
CTCAAATTCC GTTCAGAACA GCAAGAGAAA CTCAACAGCG CCCAAGACCA GTTATCTGCT
TTGGTTGAAT CAGCAGTGGG TTTAGAAGAT AGAGTTAATC GAACCGTTGT GAACTCGCCA
GTCACAGGCA AAATCAAAAC GCTGAACATC AACACCGTTG GGGGTGTTAT CCAGCCAGGC
ATGGATATCG TCGAAATTGT ACCAACTGAA GATACGTTAT TAGTAGAAGC GAAAATTGCG
CCCAAAGACA TTGCATTTTT GCGCCCAGAC CTACACGCCA TCGTGAAATT TACGGCTTAC
GACTTCACTA AGTACGGCGG CTTAGAGGGT GAATTGGAAC ACATCAGCGC AGATACAACC
CAAGATGAAG AAGGAAATAG CTTTTACATC GTTCGTGTCC GCACCGATAA AACGAATTTT
GGTCAAGATG CAGATTTACC AATCATTCCA GGAATGACGG CATCGGTCGA TATCATCACA
GGGAAGCGAA CCGTTTTGGA ATATCTACTT AAACCGATTT TAAGTGCCAA AACGAACGCC
TTGAAGGAGT AA
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| Protein sequence | MSRDNYNKLN NEELDFVDDK TAALLLNTPN SARLMLWVMV LFFIAAIGWA SWAEIDQVTV
GQGKVIPSSQ IQVVQNLEGG LVKEILVKEG QLVEKGQQLL LIDDTRFRSD FREREQQVAN
LTASVLQLSA SINSVAVNRD FKTENWRQSV VLDYGKLTFP PTLEETQPKL TQRQKAEYRE
DLDNLRNQLS VIDQQVQQKQ QDLVEIEARV RNLRQSYQYA KKELDITKPL ADEGVVPRIE
LLKLQRQVND TRREMTSSEL KIPVLKSAIR ESMLNRIDVA LKFRSEQQEK LNSAQDQLSA
LVESAVGLED RVNRTVVNSP VTGKIKTLNI NTVGGVIQPG MDIVEIVPTE DTLLVEAKIA
PKDIAFLRPD LHAIVKFTAY DFTKYGGLEG ELEHISADTT QDEEGNSFYI VRVRTDKTNF
GQDADLPIIP GMTASVDIIT GKRTVLEYLL KPILSAKTNA LKE
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