Gene VEA_000962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000962 
Symbol 
ID8559275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp1092169 
End bp1092969 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content47% 
IMG OID646408633 
Productglucosamine-6-phosphate deaminase 
Protein accessionYP_003288112 
Protein GI262396259 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0363] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase 
TIGRFAM ID[TIGR00502] glucosamine-6-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000448819 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACTTA TCCCGTTAAC TCGAGCAGCA CAAGTAGGTA AGTGGGCAGC TGCGCATATC 
GCTAAGCGTA TCAACGACTT TAAACCTACT GCTGAGCGTC CATTCGTTCT GGGTCTACCA
ACTGGTGGCA CTCCTCTAGC AACCTACAAA GCCCTAATCG AGCTTTACCA AGCCGGCGAA
GTGAGCTTCA AAAACGTCGT GACTTTCAAC ATGGATGAGT ACATTGGCAT CCCTGCAGAT
CACCCAGAGT CTTACCGCTC GTTCATGTAC AACAACTTCT TTAATCACAT TGATATCCAA
GAAGAAAACA TCAACCTACT GAACGGTAAC ACTGACGATC ACGACGCAGA ATGTAAGCGT
TACGAAGACA AAATTAAGTC TTACGGCAAG ATCAACCTGT TCATGGGCGG CGTGGGTAAC
GACGGTCACA TCGCGTTCAA CGAGCCAGCG TCATCTCTAT CTTCTCGTAC TCGCATCAAA
ACACTGACTG AAGACACTCG CATTGCGAAC TCTCGCTTCT TTGACGGCGA TATCAACCAA
GTGCCTAAAT ACGCACTGAC TATCGGTGTG GGTACACTGC TAGACGCAGA AGAAGTGATG
ATTCTGGTAA CAGGTCATAA CAAAGCTCAA GCACTTGAAG CAGCAGTAGA AGGTTGTGTA
AACCACCTAT GGACGGTTTC TGCACTTCAA CTTCACCCTA AAGCAGTGAT CGTATGTGAC
GAGCCAGCTC AACAAGAACT GAAAGTGAAG ACTGTGAAGT ACTTCTCGGA GCTAGAAGCG
GAAAACATCA AAGGTTTTTA A
 
Protein sequence
MRLIPLTRAA QVGKWAAAHI AKRINDFKPT AERPFVLGLP TGGTPLATYK ALIELYQAGE 
VSFKNVVTFN MDEYIGIPAD HPESYRSFMY NNFFNHIDIQ EENINLLNGN TDDHDAECKR
YEDKIKSYGK INLFMGGVGN DGHIAFNEPA SSLSSRTRIK TLTEDTRIAN SRFFDGDINQ
VPKYALTIGV GTLLDAEEVM ILVTGHNKAQ ALEAAVEGCV NHLWTVSALQ LHPKAVIVCD
EPAQQELKVK TVKYFSELEA ENIKGF