Gene VEA_000952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000952 
Symbol 
ID8559265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand+ 
Start bp1084600 
End bp1085208 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content45% 
IMG OID646408623 
Productmembrane protein 
Protein accessionYP_003288102 
Protein GI262396249 
COG category[S] Function unknown 
COG ID[COG1284] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.876518 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAAG ATCATAGCCT AAGAGAGAAC CTCTTGGCTC TGACGCTCGG CAGTGCGTTA 
GTGTCGCTTG GGGTAATATT TTTCAGCAAA GTAGGATTGC TCACCGGCGG TACGGCTGGT 
TTGGCGATCT TCCTTACCAA AGTGAGTGAC TTCAGCTTTG GTCAGATATT TTTCGCTCTC 
AACCTCCCTT TTTATATTTT GTCTGTAATG CGCATGGGAT GGCGCTTCAC CATTAATACC 
TTCATTGCGG TCTCGATTGT TTCTTTTGCG GTCGATCATC TGCACCATGT GATTGAAATT 
TCACGAATCG AACCTTTCTA TGCAGCACTT CTAGGTGGTG GGTTAATTGG AATAGGTATG 
TTGGTGATTT TCCGCCACAA GATGAGTTTA GGCGGTTTTA ACATTTTAGC GTTGTACCTT 
CAGGAACGTT TTGGGATTCG AGCAGGTAAA GTTCAGATGG CACTCGATTG TGCCATCGTA 
GTGATGTCGC TGTTCATTGT GGATGTGCAC CTTATCGCTC TATCCGTCCT AGGTGCCGTG 
GCGACAAACT TGATTTTGGC GATGAACCAT AAACCAGGAC GATACCAGGC AAAAGCGCAA 
ATAGCTTAA
 
Protein sequence
MDKDHSLREN LLALTLGSAL VSLGVIFFSK VGLLTGGTAG LAIFLTKVSD FSFGQIFFAL 
NLPFYILSVM RMGWRFTINT FIAVSIVSFA VDHLHHVIEI SRIEPFYAAL LGGGLIGIGM 
LVIFRHKMSL GGFNILALYL QERFGIRAGK VQMALDCAIV VMSLFIVDVH LIALSVLGAV 
ATNLILAMNH KPGRYQAKAQ IA