Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000946 |
Symbol | |
ID | 8559259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 1079258 |
End bp | 1080115 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 646408617 |
Product | predicted hydrolase or acyltransferase |
Protein accession | YP_003288096 |
Protein GI | 262396243 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2267] Lysophospholipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAAA AAATTTACTT TAATACATCG CAACGTTTCA GTATTAAGCG CAGTTTGGTG AACATTAGTA CTCGGTTACA CCACACACTT GCCCCGTCAC ATGCAAAGAA TACCGCGCGT AAGTTGCTCC TGACACCTGC TCGCACAGCA CCTAAAAACA CCGAACCTCA AGGACTTGCC AAGGGTGAAA TTAAAGGGCA TGCAGGCATT ATCAAAACCT ACACTTTGGG CTCTGGACCT ATTTGGGTGC TAACTCATGG TTGGTCTGGC ACCGCAAGTC AGTTTTATCC GTTGATGGAA CATATTGCGT CGAAAGGGTT CACCGCTTTG GCATACGATC ATCCAGCACA TGGTGAGAGT GAAGGGCAGT ATGGGCACAT TCCGGGTTTT GTCAAAGGGT TAGAAGATGT GTTAGATACG GTAGACGATA TTGTTGGTCT AGTTGGGCAC AGCATGGGCA CCGCTTCTGC TCTTGAGTGC AGACATAGCA AATTAGAAAA CAAGCCTTTA CTGCTTATTG CACCGGTATT GAATTACGTA GAGAACCTAT TCGGTAGCAT TGCGCGTTCA GGTTATTCGA TGAAGCTTTT TAATGCTGTG GTTTCAGAAG TTGAAGATCA ATTTGGTTAC CCATTACAGT CAATTGATCC GCTGAAGCGT TTGGCTGAGC GCTCGTCTCC AGCCATCATT GTTCATGATG AGCAGGATAA GTTCACTAAG TACAGTATTT CTGCACAAGC CGCTGAAGAG ATTGAAAATG TTGAGTTAGT GACAACGCAA GGTCAAGGCC ATGGCCGAGT GATGAAGTGT GGACAAGTCT TCAGTAGTTT TGACCGTTTA CTCGATCGTG CTTGGTAA
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Protein sequence | MSEKIYFNTS QRFSIKRSLV NISTRLHHTL APSHAKNTAR KLLLTPARTA PKNTEPQGLA KGEIKGHAGI IKTYTLGSGP IWVLTHGWSG TASQFYPLME HIASKGFTAL AYDHPAHGES EGQYGHIPGF VKGLEDVLDT VDDIVGLVGH SMGTASALEC RHSKLENKPL LLIAPVLNYV ENLFGSIARS GYSMKLFNAV VSEVEDQFGY PLQSIDPLKR LAERSSPAII VHDEQDKFTK YSISAQAAEE IENVELVTTQ GQGHGRVMKC GQVFSSFDRL LDRAW
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