Gene VEA_000872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000872 
Symbol 
ID8559185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp1003933 
End bp1005027 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content48% 
IMG OID646408544 
Productcytochrome c-type protein TorY 
Protein accessionYP_003288023 
Protein GI262396170 
COG category[C] Energy production and conversion 
COG ID[COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit 
TIGRFAM ID[TIGR03153] cytochrome c nitrate reductase, small subunit 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAATAA AAAAACGATA TGTTGCACTG CTGGTTGCTG CCGGCATTGG TGTGGGCTGG 
TTAACATTAG GTGGTACTGC AGCGGTAATG CATTACACCT CTGATACTGA GTTTTGTCTC
TCGTGCCACT CTATGGAAAT CCCTTACAAA GAGTATCAAG GCTCAGTGCA CTTCAGTAAT
GCGAAAGGCA TTCGTGCCGA GTGTTCTGAT TGCCACATCC CACAAGAACC GATGGACTAC
CTGATCACGA AGATTCGTGC ATCGAAAGAC ATCTACCATG AGTTCGTGAC TGGCAAGATC
GACACGCCAG AAAAATACGA AGCGCACCGC AAAGAGCTTG CGGAGATGGT GTGGGAGCAG
TTCCGTGAAA ACGACTCTGC AACGTGCCGT TCTTGCCACG ACTTTGACGC GATGGAAGAA
TTTGAGCAAT CTCGCGATGC AGCGAAAATG CACGAGTACG CAAAAGCGAA CGATCAAACG
TGTATCGATT GTCACAAAGG CGTTGCTCAC TTTGCACCAG AAGCAGAGCT AGACAGCAAG
GCATTTGAAA CGTTGATGAG CTTCACCACA AAAACATCAC CTGGTGCCAA AGTCGTTTAC
CCTGTGACTG AAATCGCAAT GGGTGAGATG GGTAAAATTA ACCCAACGAC GAAATTAGAA
GTAATCAGCT CTGAAGGTGA TGAGCGTACT GTTAAGTTGG ACGCATTCCA AATGAAAGGC
GCAGAGCAAG TGCTGTACAT GGGTGAAGGT CAACGTGCCA TCGTAGCAAC GCTAACCGAG
CAAGGTCAGC AAGCTCTTGA GGGCGGTGAG TTTAAGGCCG ACGTTTACGG CAACGAATGG
CGCGCAGTGT CACTAACAGG CACGATCGAT TCTCCTGTTG TGGATACACT TGACCCAGTT
TGGTCATACG CAGAAGAGCT AGACAACGTT TATTGTGCAA CTTGTCACGC GAAAATTCCT
TCAAATCACT TCACAGTGAA CGCATGGGGA CCAGTGGCGA AGAGTATGGG TGATCGAACA
GACATCACTG CCGAAAACCT AGAAATTCTT ACTAAGTTCT TCCAGCACCA CGCGAAAGAT
GTGGTTGGTC ACTAA
 
Protein sequence
MSIKKRYVAL LVAAGIGVGW LTLGGTAAVM HYTSDTEFCL SCHSMEIPYK EYQGSVHFSN 
AKGIRAECSD CHIPQEPMDY LITKIRASKD IYHEFVTGKI DTPEKYEAHR KELAEMVWEQ
FRENDSATCR SCHDFDAMEE FEQSRDAAKM HEYAKANDQT CIDCHKGVAH FAPEAELDSK
AFETLMSFTT KTSPGAKVVY PVTEIAMGEM GKINPTTKLE VISSEGDERT VKLDAFQMKG
AEQVLYMGEG QRAIVATLTE QGQQALEGGE FKADVYGNEW RAVSLTGTID SPVVDTLDPV
WSYAEELDNV YCATCHAKIP SNHFTVNAWG PVAKSMGDRT DITAENLEIL TKFFQHHAKD
VVGH