Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000869 |
Symbol | |
ID | 8559182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | + |
Start bp | 999871 |
End bp | 1000485 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 646408541 |
Product | thiamin-phosphate pyrophosphorylase |
Protein accession | YP_003288020 |
Protein GI | 262396167 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0352] Thiamine monophosphate synthase |
TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCCT ATCGTTTGTA TTTGGTCACC GACGACCAAC AAGATTTACC CACTCTCAAA CACGTTGTAA GAAAGGCGGT AGAAGGTGGG GTTACCATGG TACAGGTGCG CGAAAAACAT GGTGACGTTC GTGCATTTAT TGAACGAGCT CAAGCCGTGA AGACGATCCT TGAAGGCACT GGCGTCCCGT TAATCATCAA TGATCGTGTT GATGTTGCCC TTGCCGTCGA TGCCGATGGT GTTCACCTCG GGCAGTCAGA CATGCCAGCA GAGATCGCTC GTCAATTGAT TGGCCCAAAC AAGATCCTCG GCTTATCGAT TGAGACTGAA GATCAACTGG CAGAGGCGGA TTCTCTTCCG ATTGATTACA TCGGTTTGAG TGCCATCTTC GCTACACCAA CCAAAACCAA CACCAAAAAA CACTGGGGTA TTGAAGGTTT GAAGATGGCG CTGAACACCA CGTCCTTACC AATCGTCGCT ATTGGTGGCA TCAACGAAAC CAACATTCCT GCCCTGAGTG CGACAGGTGT ACATGGTTTG GCTTTGGTTT CTGCCATTTG TCATGCAGAA AACCCAACCA AAGCAGCAGA GTACTTACTT TCTCTGATGG ATTAA
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Protein sequence | MNAYRLYLVT DDQQDLPTLK HVVRKAVEGG VTMVQVREKH GDVRAFIERA QAVKTILEGT GVPLIINDRV DVALAVDADG VHLGQSDMPA EIARQLIGPN KILGLSIETE DQLAEADSLP IDYIGLSAIF ATPTKTNTKK HWGIEGLKMA LNTTSLPIVA IGGINETNIP ALSATGVHGL ALVSAICHAE NPTKAAEYLL SLMD
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