| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000851 |
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| Symbol | |
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| ID | 8559157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 977105 |
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| End bp | 977770 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646408516 |
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| Product | probable transcriptional regulator SyrB |
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| Protein accession | YP_003288002 |
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| Protein GI | 262396149 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00675785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCGAG TTTTGATAGT GGATGATGAC GTTCCTTTGT GTGAGCTATT AGAGGCAGTT
TTGCAAGAGG AGGGTTATAT TGTCTCTTCT GTACATTGCG GTGAAAGTGC TTTGCAATAT
ATGGAAAAAA CGCCGGTAGA TCTTGTACTG CTTGATGTCA TGTTACCAAA CCTTAACGGC
ATGCAAGTTG CCCGTAGAAT CTGTCAACGC TTCGCGACAC CTATTCTAAT GCTTACTGCT
CTTAATGATG AAAACTCGAT GCTTGATGGC TACCAAGCGG GAGCCGATCA GTACATAGGA
AAGCCTTTTA ATGTTGCTGA GCTTCTGATG CGCATCAAAG CGATTCTTCG TCGTGTTGGT
TTAGAGCGCC AACGTCAGAC GATGTGCAGT ACCGTTCAAA CGATCAGTGA TCAGCTCAAT
AGCTTACCAC TCACAAGCAC GGAAGCCGAA TTACTGAGCT ATTTAGTCAA AAACCAAGGT
GTGGTGATTT CAAAAGCGGA ACTCCAAACC GAAGTATTAA AGAAAGAGCT AAGCCCTTTT
GACCGCAACC TTGATATGCA CATCAGTAAT ATACGTCGCA AGCTAGTAGA AGCAGGGCTC
TCTAAGCAAC ATATCAAAAC CTTCCGTGGC AAAGGTTACA GCTACCTAGA GGCTGTAAAC
AATTAA
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| Protein sequence | MSRVLIVDDD VPLCELLEAV LQEEGYIVSS VHCGESALQY MEKTPVDLVL LDVMLPNLNG
MQVARRICQR FATPILMLTA LNDENSMLDG YQAGADQYIG KPFNVAELLM RIKAILRRVG
LERQRQTMCS TVQTISDQLN SLPLTSTEAE LLSYLVKNQG VVISKAELQT EVLKKELSPF
DRNLDMHISN IRRKLVEAGL SKQHIKTFRG KGYSYLEAVN N
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