Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000832 |
Symbol | |
ID | 8559138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 959917 |
End bp | 960912 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 646408497 |
Product | outer membrane protein C precursor |
Protein accession | YP_003287983 |
Protein GI | 262396130 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0331596 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATGA AAACTCTAGC CGTTGCAGTG GCGGCACTAG CATGTGGTTC ACAGGCCTTC GCAGCAGAAG TTTATAACAG CGATGGTACA TCTTTATCGA TCGGCGGTCA CGTTTCAGTT GGCGTGGGTG AGTACTACGA GGAAGATGTG AAAGTTCATC AAGTGTCTCC ACGTATTAAC GTCGCGGGTA AGAAAGACAT TGGCAACGGT ATCACTATCG ACGCTAAAGG CGAATGGGCG CTTAACTACT TAAATGGTGG TGAACAGTCA TTCAAAACTC GTCTAGGTTA CATCGGTGCA ACTCACGAGC AGTACGGTCG CCTTGTTGCA GGTACTCAAT GGTCACCTTA CTACGATGTC GCTGGTGTTG CGGATCTACC AATCGCGTTT GCGAACGACT TTTTGTACGA CAACCACGGC AACCTAGGCT CAGCTCGTGC TGATAAAATG CTTAGCTACC GTAAAGGTTT TGAATTTGGT GAAGGCTTTG CTTTCAACCT AGGTCTAGGT TGGCAAGGTG AGCAAACTTC AGATGCAACA ACATACGAGC AACGTGGTCA AGTTGCACTG AGCGGTTCTG TAGCTGGCTT TGGCCTAGGC TACGTATACA GCGGCGGTGA TGTTAAAAAT GCGACTCTAG GTACTAAGAA CGCTGAATCA CACCTATTCT CTGTAAACTA CGGTCAGTAC GGTTCAGGTC TATACGCAGC AGTAGTATAC GGTATGAACG ATTACTTCTA CGAGATGCGT AAAGAGACTT CTCAAATTGA AGCTCTTTTG GCATACGGCG TGAACGATTG GACATTCAGC GTTAACTACG AAGGCGTAGA AGACGAAGAA GACAACAAGA CAGTTTCAAG CGAAACTGCG CTACAAGCAG AGTACGCTGT AACTCCTGCT TTCGTAACGT TTGCTGCTTA CCAGTTTGAC CTAGGTAACG ATTACACTAG CGAAGAGAAC GACTACTGGA CTCTAGGTGC TCGTTACTAC TTCTAA
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Protein sequence | MKMKTLAVAV AALACGSQAF AAEVYNSDGT SLSIGGHVSV GVGEYYEEDV KVHQVSPRIN VAGKKDIGNG ITIDAKGEWA LNYLNGGEQS FKTRLGYIGA THEQYGRLVA GTQWSPYYDV AGVADLPIAF ANDFLYDNHG NLGSARADKM LSYRKGFEFG EGFAFNLGLG WQGEQTSDAT TYEQRGQVAL SGSVAGFGLG YVYSGGDVKN ATLGTKNAES HLFSVNYGQY GSGLYAAVVY GMNDYFYEMR KETSQIEALL AYGVNDWTFS VNYEGVEDEE DNKTVSSETA LQAEYAVTPA FVTFAAYQFD LGNDYTSEEN DYWTLGARYY F
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