Gene VEA_000832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000832 
Symbol 
ID8559138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp959917 
End bp960912 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content47% 
IMG OID646408497 
Productouter membrane protein C precursor 
Protein accessionYP_003287983 
Protein GI262396130 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0331596 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATGA AAACTCTAGC CGTTGCAGTG GCGGCACTAG CATGTGGTTC ACAGGCCTTC 
GCAGCAGAAG TTTATAACAG CGATGGTACA TCTTTATCGA TCGGCGGTCA CGTTTCAGTT
GGCGTGGGTG AGTACTACGA GGAAGATGTG AAAGTTCATC AAGTGTCTCC ACGTATTAAC
GTCGCGGGTA AGAAAGACAT TGGCAACGGT ATCACTATCG ACGCTAAAGG CGAATGGGCG
CTTAACTACT TAAATGGTGG TGAACAGTCA TTCAAAACTC GTCTAGGTTA CATCGGTGCA
ACTCACGAGC AGTACGGTCG CCTTGTTGCA GGTACTCAAT GGTCACCTTA CTACGATGTC
GCTGGTGTTG CGGATCTACC AATCGCGTTT GCGAACGACT TTTTGTACGA CAACCACGGC
AACCTAGGCT CAGCTCGTGC TGATAAAATG CTTAGCTACC GTAAAGGTTT TGAATTTGGT
GAAGGCTTTG CTTTCAACCT AGGTCTAGGT TGGCAAGGTG AGCAAACTTC AGATGCAACA
ACATACGAGC AACGTGGTCA AGTTGCACTG AGCGGTTCTG TAGCTGGCTT TGGCCTAGGC
TACGTATACA GCGGCGGTGA TGTTAAAAAT GCGACTCTAG GTACTAAGAA CGCTGAATCA
CACCTATTCT CTGTAAACTA CGGTCAGTAC GGTTCAGGTC TATACGCAGC AGTAGTATAC
GGTATGAACG ATTACTTCTA CGAGATGCGT AAAGAGACTT CTCAAATTGA AGCTCTTTTG
GCATACGGCG TGAACGATTG GACATTCAGC GTTAACTACG AAGGCGTAGA AGACGAAGAA
GACAACAAGA CAGTTTCAAG CGAAACTGCG CTACAAGCAG AGTACGCTGT AACTCCTGCT
TTCGTAACGT TTGCTGCTTA CCAGTTTGAC CTAGGTAACG ATTACACTAG CGAAGAGAAC
GACTACTGGA CTCTAGGTGC TCGTTACTAC TTCTAA
 
Protein sequence
MKMKTLAVAV AALACGSQAF AAEVYNSDGT SLSIGGHVSV GVGEYYEEDV KVHQVSPRIN 
VAGKKDIGNG ITIDAKGEWA LNYLNGGEQS FKTRLGYIGA THEQYGRLVA GTQWSPYYDV
AGVADLPIAF ANDFLYDNHG NLGSARADKM LSYRKGFEFG EGFAFNLGLG WQGEQTSDAT
TYEQRGQVAL SGSVAGFGLG YVYSGGDVKN ATLGTKNAES HLFSVNYGQY GSGLYAAVVY
GMNDYFYEMR KETSQIEALL AYGVNDWTFS VNYEGVEDEE DNKTVSSETA LQAEYAVTPA
FVTFAAYQFD LGNDYTSEEN DYWTLGARYY F