Gene VEA_000793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000793 
Symbol 
ID8559098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp908184 
End bp909326 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content42% 
IMG OID646408457 
Productpeptide methionine sulfoxide reductase 
Protein accessionYP_003287944 
Protein GI262396091 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0225] Peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00357] methionine-R-sulfoxide reductase
[TIGR00401] methionine-S-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAATA TATCTAAGTT ATTGGTCGGA TTCTCTTTCG CACTTCCTGT CTTGTTTCTA 
CTTTTGAGTA AAGCAGGCAC CGCCGATACG ATGGATAAGA TGAAGACTTC AGAGAATGCA
GAAATCGCCA TACTGGCTGG CGGCTGTTTC TGGTGTACAG AATCTGATTT GGAACAGTTA
ACTGGCGTAG TCGATGTCGT ATCAGGCTAT TCTGGTGGTC ATGTTGAAAA CCCAACTTAT
CGCCAAGTTT CATCAGGTAA ATCAGGTCAC ATAGAAGTGA TCGAAGTTAA GTACGATCCT
AAAGTGGTTA GTTACGAGCA AGTGTTGGAC TACTTTTTCC GTCATATCGA TCCTACTGAC
GATAAAGGCT CTTTTGTCGA CCGTGGCCCA CAGTATCGCC CTGCTATTTT CTATCATAAC
GCTGAACAAA AGCAGATCGC AGAACAGTTT ATAATGGAAA TCGACAAGGC GATGATCTAT
CCAAAACCGT TGAAAACAGA ATTGATCGAG TTTGAAAAGT TTTATCCCGC AGAAGAGTAT
CACCAAGACT ATTACAAAAA GAGCAGCTTA AAGTATAAGT ATTATCGCTA TGCGTCTGGT
CGAGATAAAT ACTTGGATGA AGTATTTGGT GATGATCGTA AAGAGCCCCC AAAAACGCTT
CGTCAGTTGA TCGAAGAAAA AAAGTTGCTA TCAAAAGTGA AAGAGTACAG TAAGCCTGCT
AAGTCCGAGA TCAAATCAAA CTTAACGGAG TTGCAATACT ACGTAACACA AGAAGAAGGC
ACCGAGCGTC CGTTCGACAA CGAATATTGG GACAACAAAG AAGCGGGGAT TTACGTTGAT
ATCGTAACTG GTGAGCCGTT GTTTTCTTCT ACCGATAAAT ACAAATCGGG GACGGGTTGG
CCAAGTTTCA CTAAGCCAAT CAACCCAGGT TACATCGTTG AAAAAACCGA TTACAAACTG
ATTTATCCAA GAACGGAAGT TCGCAGTAAG TTTGGCGATT CTCACCTTGG TCATGTTTTT
AAAGACGGTC CGAAGCCAAC AGGATTACGC TACTGCATGA ACTCTGCGGC AATGAAATTT
GTACCTGTAA GTGAAATGAA AACGCAGGGG TATGAAGAGT ATCTGTATCT CTTTGATAAA
TAG
 
Protein sequence
MKNISKLLVG FSFALPVLFL LLSKAGTADT MDKMKTSENA EIAILAGGCF WCTESDLEQL 
TGVVDVVSGY SGGHVENPTY RQVSSGKSGH IEVIEVKYDP KVVSYEQVLD YFFRHIDPTD
DKGSFVDRGP QYRPAIFYHN AEQKQIAEQF IMEIDKAMIY PKPLKTELIE FEKFYPAEEY
HQDYYKKSSL KYKYYRYASG RDKYLDEVFG DDRKEPPKTL RQLIEEKKLL SKVKEYSKPA
KSEIKSNLTE LQYYVTQEEG TERPFDNEYW DNKEAGIYVD IVTGEPLFSS TDKYKSGTGW
PSFTKPINPG YIVEKTDYKL IYPRTEVRSK FGDSHLGHVF KDGPKPTGLR YCMNSAAMKF
VPVSEMKTQG YEEYLYLFDK