Gene VEA_000738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000738 
Symbol 
ID8559043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand- 
Start bp854532 
End bp855215 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content45% 
IMG OID646408402 
Productflagellar basal-body rod modification protein FlgD 
Protein accessionYP_003287889 
Protein GI262396036 
COG category[N] Cell motility 
COG ID[COG1843] Flagellar hook capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCTCG CACAATATAC ACCTTTATCG TCTGATGCTC CTGTGAGCAC TAAAGCAAAA 
GAGAACAATG GCATTGCACC AAATCCTAAA GATATGAACA GTGCTTCTTC ATTAGAGAAC 
GAATTCATTT CTTTGATGGT GGCGCAGATC CAAAACCAAG ATCCACTTAA CCCACTTGAT 
GGCACGGAAT ACGTTGGTCA GTTGGCTCAA TTCTCTCAAG TTCAAAGTAC CGAGAATATG 
TCCAGGACAA TGCAACAGAG CATGATTCTC CTCGACAACA TGCAAGTGCT ATCGACAGCG 
GGGCTCGTCG GACAAACCGT TTACGTCAAC TCCAAAGAAT TTGAGCTTGG TGAAGGCGTA 
CAGAACGGAA AAATCGAACT CGCTCATAGC TCAAACCAAG TGACGTTAGT TGTGAAAGAT 
GAGTTTGGTC AATCCACTAA AGTGCCATTA GGTGCTCACG GCAAAGGTGA CGTCGACTTT 
TCAATTAATC CTGAAGAACT TGGTCTTAAA CCAGGCAAAT ACTCAGTGGC AGTAGAAGTG 
CAAGAAGGGC AAGCAAGTCC AAATGTGCTG ATGGCAGGCA CTGTTGAGCA AGTGCGCATT 
CCTAATACCG GTGGCGCAGC ATTAGTCAAT GTCCATGGCG TTGGCAACGT TCCTTTCTAT 
CAAATCACTC AGTTTGGTGC TTAA
 
Protein sequence
MSLAQYTPLS SDAPVSTKAK ENNGIAPNPK DMNSASSLEN EFISLMVAQI QNQDPLNPLD 
GTEYVGQLAQ FSQVQSTENM SRTMQQSMIL LDNMQVLSTA GLVGQTVYVN SKEFELGEGV 
QNGKIELAHS SNQVTLVVKD EFGQSTKVPL GAHGKGDVDF SINPEELGLK PGKYSVAVEV 
QEGQASPNVL MAGTVEQVRI PNTGGAALVN VHGVGNVPFY QITQFGA