Gene VEA_000737 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000737 
Symbol 
ID8559042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp853308 
End bp854504 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content48% 
IMG OID646408401 
Productflagellar hook protein FlgE 
Protein accessionYP_003287888 
Protein GI262396035 
COG category[N] Cell motility 
COG ID[COG1749] Flagellar hook protein FlgE 
TIGRFAM ID[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTTA ACATCGCACT AAGTGGTCTG GACGCGACCA ACACAGAGCT AAACACAATC 
AGTCACAACA TTGCCAACGC ATCAACGTAT GGTTTTAAAG GTGGCCGCAC AGAATTCTCC
GCAGTATATA ACGGCATGCA ACCTGGTGGT GTAGAAGTCG CGTCAATTTC ACAGAACTTC
GACAAAGACG GCAGTATCTC AGGAACTGGC CGTGCGATGG ACTTGGCGAT CAACGGTGGC
GGATTCTTTG TCACTAAAGA CAATATGGGT CAAACGCTAT ACACGCGTTC AGGTGTATTC
GCGACAGATA AAGATAACTT TGTTACCGCT AACAGTGGCG CAAAACTGCA AGGTTACAGT
GTGGATAGCA ACAACAACCT GATGACAGGC TCTGTGGGCA ATATCCAAGT ATCTACGTCA
TCACTGAATG CAAAAGCGAC AGACGGTCTT GATTTTGTTG CAAACTTTGA TGCAAGTGCG
TCTGCCATTG ATAAAACGGT AACGCCGTTT AATCCGGACG ATCCAAACTC ATTCAATTCG
TCTTACACCA CAAAAGTCTA TGACTCGCTG GGTAACTCGC ACACGGTAAC CCAGTACTTC
ACTAAGACCG CTTCTAACTC TTGGGAAGTG AATGTTCAAG TGGATGGTGG CGCAACACCA
GTGACAACGG TACCAGTAAC GTTTGACAAA GACGGTTCGC TTTCTTCACC GACGGCTCCG
TTTAATGTTT CATTCCCTGC GGCAGGCGCA AACGCGATGA GTGTCGACAT TAACTTGAAA
GGCAGCACGC AGTTTGGTGC TAAATTCGGC GTAAGTACTA ACAGCCCGAA CGGTTACACA
TCCGGTGAGC TTGCAGGTGT ACGCGTTGAA GGTAATGGCA TGGTTTACGC GACCTACACT
AACGGCCAAT CACAGCTGCA AGGTCAAGTT GTACTTGCAG ACTTCGCCAA CACACAAGGT
TTAGCAAAAG TGAGTGGTAC GGCATGGACT CAAAGCTTTA GCTCTGGTGC GCCAATCACG
GGTGTCCCTG GTTCAGGTAC GTTGGGTGAT TTAACCCCAG GTGCGTTAGA AGGTTCTAAC
GTTGACCTAA CCAGTGAGCT TGTGGCGCTA ATGACCGCAC AGCGTAACTA CCAAGCAAAC
GCGAAAACCA TCTCTACCAG CGACAAGCTA ACTCAAGCTT TGTTTAACGC GGTGTAA
 
Protein sequence
MSFNIALSGL DATNTELNTI SHNIANASTY GFKGGRTEFS AVYNGMQPGG VEVASISQNF 
DKDGSISGTG RAMDLAINGG GFFVTKDNMG QTLYTRSGVF ATDKDNFVTA NSGAKLQGYS
VDSNNNLMTG SVGNIQVSTS SLNAKATDGL DFVANFDASA SAIDKTVTPF NPDDPNSFNS
SYTTKVYDSL GNSHTVTQYF TKTASNSWEV NVQVDGGATP VTTVPVTFDK DGSLSSPTAP
FNVSFPAAGA NAMSVDINLK GSTQFGAKFG VSTNSPNGYT SGELAGVRVE GNGMVYATYT
NGQSQLQGQV VLADFANTQG LAKVSGTAWT QSFSSGAPIT GVPGSGTLGD LTPGALEGSN
VDLTSELVAL MTAQRNYQAN AKTISTSDKL TQALFNAV