| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000727 |
|---|
| Symbol | |
|---|
| ID | 8559032 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | - |
|---|
| Start bp | 841057 |
|---|
| End bp | 842856 |
|---|
| Gene Length | 1800 bp |
|---|
| Protein Length | 599 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 646408391 |
|---|
| Product | NhaP-type Na+/H+ and K+/H+ antiporter |
|---|
| Protein accession | YP_003287878 |
|---|
| Protein GI | 262396025 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGTGG GTAATGAAGC GCTGGTTCTA TCAGCGGTTG GGGTCATTGG TTTAGGTTGT
CAGTGGTTGG CATGGCGATT GCGCTTACCA GCGATTTTAT TTTTGCTGCT AGCTGGGTTG
ATTGTCGGGC CATTTATGCA GTGGTTAAAT CCAGATGAGA TTTTAGGGAA TTTGCTCTTT
CCGTTGGTTT CATTGGCGGT TGCGGTGATT CTTTTCGAAG GCAGCTTGAC CCTAAACTTT
AAAGAAATTC GCGGGGTGAG TGGCTCAGTC TGGAGTATCG TTTCCATCGG GGCCATCATT
TCGTGGGCAG CAACCAGTAT TGCGACGCAC TATTTCCTCG GTTTTACTTG GGAGCTCGCC
ATGTTGTTCG GCAGCTTAAC CGTGGTAACA GGTCCGACGG TGATCGTGCC ACTTCTTCGG
ACGGTAAGGC CTAACAGTAC GCTTGCTAAT ATTTTGCGTT GGGAGGGGAT CTTGATTGAT
CCACTCGGTG CGCTTTTTGT TGTGATGGTT TATGAGTTCA TCGTATCGCA CAGCGCGATA
AATAGCGTCG AAGTGTTCGG GACGCTCATT GCCGTGGGCG TCATTCTTGG TGCGGCCTCT
GGCGCAGCAG TCGCAACGAT TATGCGCCGT GCGTGGCTAC CGGAATACTT GCAGCCATTT
GCAGTTTTGA TGATCGTGCT CGGCGTATTT TCCGTCTCCA ACCATATTGA GTCTGAAGCC
GGATTACTCA CGGTTACTGT AATGGGTATG TGGCTTGCCA ACGCAAAGGG AATCAATATT
CAACAAATTC TGCACTTTAA AGAGCACTTG ACCATATTGC TGATCACCGG CCTATTTATT
TTCCTTGCTG CACGCATCAG CTTGGATGAT TTTGCTGCGC TGGGTAGTGG CGCGTTATTG
CTGTTTGTAT TTATGCAGTT GGTGTCGCGC CCGTTGTCGA TTTTCCTCTC AACCATCCGC
AGTAACTTGA GACTTAAAGA TAAACTGTTT CTGTCTTGGG TTGCACCGCG CGGTATTGTC
GCTGCTTCTA TTTCGTCTCT TTTTGCGATC AAATTGACCG AATACGGTAT TGATGAAGCG
ATTTTACTGG TTCCTATGAC CTTCATGGTG ATCATCGGAA CGGTTGTTTT ACAAAGTGCA
ACGGCACGTC CTGTCGCATT GATGTTGGGC GTCGCGGAGC CAGCGCCACG CGGCTTCTTG
TTGATTGGTG CTAACCGAGT AGCCAGAGAA ATTGGTCAAG CGTTGGCACG TTATGACCGC
CGCATATTGA TGACCGATTC TAACTGGGAG TACATCAGTC AAGTTCGTAT GTTGGGGCTG
GATTACTACT ACGGAAATCC GATTTCTAGT CACGCAGATG ACAATTTGAA CCTGATAGGG
GTGGGACAAG TCGTTGCATT AACACCTGAC CAGCATTTCA ACATTATGGC TTGCATGCAA
TTTGTCGACG AGTTTGGTGA AGATAGAGTT CACTGCTTGC AAAAAGTGAA AACCAACGGC
AATGGTAGCG AGAAGCACTC CGTGGCTCAG GAGTACCACG GTAAATTGCT GATGGGCGGT
AACGTAAGCT ATACCCAGCT GGCCAGTTTG TTGAGCCGCG GTGCAGAGAT AAAACACACG
AAATTGAGCG ACAACTTTAC GTATCAAGAC TATTTAGCGC ATCACAAAGG GAACTCGGTA
GTGCCGTTGT TCCACGTTGA AGAAAAAGGG AAAATTCAAT TCTGTGATGA TCCTGAGCAG
TTTGCTCCAA CCACCACAAG CACCGTTGTG TCTCTGATTC TGTCAGAAAG CGCAAAGTAA
|
|---|
| Protein sequence | MQVGNEALVL SAVGVIGLGC QWLAWRLRLP AILFLLLAGL IVGPFMQWLN PDEILGNLLF
PLVSLAVAVI LFEGSLTLNF KEIRGVSGSV WSIVSIGAII SWAATSIATH YFLGFTWELA
MLFGSLTVVT GPTVIVPLLR TVRPNSTLAN ILRWEGILID PLGALFVVMV YEFIVSHSAI
NSVEVFGTLI AVGVILGAAS GAAVATIMRR AWLPEYLQPF AVLMIVLGVF SVSNHIESEA
GLLTVTVMGM WLANAKGINI QQILHFKEHL TILLITGLFI FLAARISLDD FAALGSGALL
LFVFMQLVSR PLSIFLSTIR SNLRLKDKLF LSWVAPRGIV AASISSLFAI KLTEYGIDEA
ILLVPMTFMV IIGTVVLQSA TARPVALMLG VAEPAPRGFL LIGANRVARE IGQALARYDR
RILMTDSNWE YISQVRMLGL DYYYGNPISS HADDNLNLIG VGQVVALTPD QHFNIMACMQ
FVDEFGEDRV HCLQKVKTNG NGSEKHSVAQ EYHGKLLMGG NVSYTQLASL LSRGAEIKHT
KLSDNFTYQD YLAHHKGNSV VPLFHVEEKG KIQFCDDPEQ FAPTTTSTVV SLILSESAK
|
|---|
| |