| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000688 |
|---|
| Symbol | |
|---|
| ID | 8558993 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | + |
|---|
| Start bp | 797193 |
|---|
| End bp | 797729 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 646408352 |
|---|
| Product | lipoprotein |
|---|
| Protein accession | YP_003287839 |
|---|
| Protein GI | 262395986 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3015] Uncharacterized lipoprotein NlpE involved in copper resistance |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.222485 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA CAATGTTGGC ACTAACAGGC GCGGTAATCA TTCTTGCAGG CTGTCAAGAT
GAGAAACCTG CCGAAACAAG CGCAGTTGAA GTACCTCAAG CGACGGAAAC TGAAGTCACT
ACTAGCGCAG AAGTTACTAC AGAGACAATT GACACGCTGC CAGTAGCAGA AGAACAAGTC
ATCACTGAAG AAACATTTGT AGACTCTGAG CATAACGCAC AAAATGCCCT GGACTGGAAC
GGCACATACA AAGGTACGCT TCCATGTGCG GATTGTTCAG GTATCGACAT GATCATCACA
CTAAATCAAG ATGGCACTTA CGTACTTGAA GAAAGCTACC AAGACAAAGA AGACGGTCAG
TCAAAGTCTG AAGGCCAATT CACTTGGGAT GCAAACGGCA GCATCGTAAC GTTGACAAAC
GAAGATGCAC CAAACCAATA CTTTGTTGGT GAAAATGTAC TTATGAAGCT AGACATGAAT
GGCGAAAAAG TAACAGGTGA CCTAGCACCG TTATACAACT TAACGAAACA ACAATAA
|
|---|
| Protein sequence | MKKTMLALTG AVIILAGCQD EKPAETSAVE VPQATETEVT TSAEVTTETI DTLPVAEEQV
ITEETFVDSE HNAQNALDWN GTYKGTLPCA DCSGIDMIIT LNQDGTYVLE ESYQDKEDGQ
SKSEGQFTWD ANGSIVTLTN EDAPNQYFVG ENVLMKLDMN GEKVTGDLAP LYNLTKQQ
|
|---|
| |