Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000665 |
Symbol | |
ID | 8558970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | + |
Start bp | 772754 |
End bp | 773773 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 646408329 |
Product | spermidine putrescine transport ATP-binding protein PotA |
Protein accession | YP_003287816 |
Protein GI | 262395963 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.518175 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTACG TAACAGCGAA AAATCTGACT AAACGTTTTG GTGATAACAC CGTATTTGAG GACATTCACT TTAACATCGA GCAAGGTGAA TTCATTACGC TTTTGGGCCC TAGCGGTTGT GGTAAATCGA CACTACTTCG CAGCCTTGCT GGGCTTAACC CTGTCGATGG AGGCGAGATT TGGGTAAACG GAGAAGATAT CACGCATCAA GCCCCGCAAG AGCGTGGTAT TGGGATGGTC TTTCAATCGT ATGCGCTGTT TCCCAATATG ACCGTTGAAG GCAACATTGC ATTTGGCTTA AAAATGAAAA AGCTTTCGAA TGATGATATT CGACGTGAAG TGGCTAAAGT CATTAAACTG GTGGATCTGG CAGGTAAAGA AAAACACTAT CCGCATCAAC TTTCTGGCGG TCAGCGCCAG CGTGTCGCAC TCGCCCGAGC GTTGGTGGTG AAACCTCGCA TATTATTGCT TGATGAGCCA CTTTCTGCGC TTGATGCCAA AATCCGCAAA CATCTTCGTC AGCAAATCCG AGATATTCAG AAAGAGATGA ATCTCACCAC TATCTTCGTA ACTCATGACC AAGAAGAGGC GATGATTATG TCTGATCGTA TCTTCCTAAT GAGTAAAGGG GAAATTGTTC AAGCAGGAAC ACCTGAAGAA ATTTATACTC ATCCTGCTAA CGAGTTTGTG GCCGGTTTCA TGGGACACTA CAACCTTGTA GAAGCCAATA AAGCCAAGCA ACTCTTCAAC ATTGATACCG AATGGAAAGT AGCGATTCGC CCAGAGTCTA TATATGTAAA AGAGCAAGGT CGTCAATATG ATAGCCACAT CTCAGCGCCA CAAGTAGGTA CGATCACCAA CCACCAGCTT CTAGGTAATG TTATTCGCTA TCAAGTGAAC GTTGAAGAGT GTGAGCTCAC TGTTGACTTG CTTAACCGCT CTTCAGAACG CTTACTAGCG AATGGCAGCC AACTAGAGCT ACTCTTTAAC CTAAACGAAA TTCAACCAGT GAGAGCCTAA
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Protein sequence | MSYVTAKNLT KRFGDNTVFE DIHFNIEQGE FITLLGPSGC GKSTLLRSLA GLNPVDGGEI WVNGEDITHQ APQERGIGMV FQSYALFPNM TVEGNIAFGL KMKKLSNDDI RREVAKVIKL VDLAGKEKHY PHQLSGGQRQ RVALARALVV KPRILLLDEP LSALDAKIRK HLRQQIRDIQ KEMNLTTIFV THDQEEAMIM SDRIFLMSKG EIVQAGTPEE IYTHPANEFV AGFMGHYNLV EANKAKQLFN IDTEWKVAIR PESIYVKEQG RQYDSHISAP QVGTITNHQL LGNVIRYQVN VEECELTVDL LNRSSERLLA NGSQLELLFN LNEIQPVRA
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