| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000619 |
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| Symbol | |
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| ID | 8558924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 717852 |
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| End bp | 719420 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646408283 |
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| Product | ATP-dependent RNA helicase RhlE |
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| Protein accession | YP_003287770 |
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| Protein GI | 262395917 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTTTTA CCTCTTTAGG TCTATCTGCT CCAATCCTTA AAGCTATTCA AGAAAAAGGC
TACGACACCC CTTCGCCAAT TCAGGCAAAA GCAATTCCTG CTATTTTGGA AGGGAAAGAC
GTAATGGCAG CAGCGCAGAC TGGTACAGGT AAAACTGCAG GCTTTACGCT ACCGATTCTT
GAGCGTTTAT CGAACGGCTC TCGCGTTCGT GCTAACCAAG TTCGAGCACT TATCCTGACG
CCAACGCGTG AACTTGCAGC TCAGGTGCAA GAAAACGTGT TTATGTACGG CCGTCACCTT
CCACTAAGCA GTGCAGTTGT TTTTGGTGGT GTGAAGATCA ACCCGCAAAT GCAGCGTCTT
CGCAAAGGTG CGGATGTGCT GGTAGCAACA CCAGGCCGCC TGATGGATTT GTACAACCAA
AATGCAGTGA AGTTCGACCA ACTGGAAGTG CTAGTACTGG ACGAAGCAGA CCGCATGCTG
GATATGGGCT TTATCCGCGA TATTCGCAAA ATCCTAGCCC TGCTACCAAA ACAACGTCAG
AACCTACTTT TCTCGGCGAC TTTCTCGGAT GAAATCCGCG ACCTTGCGAA AGGTTTGGTG
AACAACCCGG TTGAGATTTC CGTTAACCCG GCAAACTCGA CGGCGAGAAC GGTTGAGCAA
AGCATCTACC CAGCAGACGT GAAGAAGAAA GCACCGATGT TGGTTAAATT GATCAAAGAC
GGCGATTGGA AGCAAGTGCT GGTGTTTACG AAAACGAAAC ACGGCGCAAA CCGTCTGGCG
AAGTTCCTGA TCGAACAAAA CCTACCGGCT GCTGCCATCC ACGGCAACAA GAGCCAAGGC
GCGCGTACTA AAGCACTGGC GGATTTTAAA TCGGGTGAAA TTCGTGTGTT GGTCGCGACG
GACATTGCTG CGCGCGGTAT CGATATTCCT CAATTACCAC AAGTGGTGAA CTTTGAGCTA
CCTAAAGTGG CAGAAGACTA CGTTCACCGT ATTGGTCGTA CTGGCCGCGC GGGCGAAGTA
GGTAAAGCGA TTTCACTCGT GTGTGCGCTA GAAGCATCTG AGTTGTTTGC GATTGAACGT
TTGATTCAAG AAGTGCTACC ACGTAAAGAG TTGGAAGGTT TTGCGCCAAC CAATGTAGTG
CCAGAATCTA AACTGGATAC TCGACCAATC AAACCAAAAA AACCTAAGAA GCCGAAAAAA
CCAAAAGCGC CAAATGCTGC GGGTGAAAAC GCTCCAGCAA CCGAAAAGAA AGCAGGCAAT
GGTGCAAACA AACCTAAACG TCGCTTCAAC GGTGGTAACA ACGGCAACAA AAACAGCACC
AATCAAGGTG GTGCGGGCAA GCCTAAAAGC AACAGTGAAG GCCAAGGTCG TACAAACAGT
AAACCAGATG ACCGTAAACC TAACGGCAAC AAGCCAAATG GCAATAAACC GAATGGAAAT
AAACCAAACG GTAGTAAGAG TGGCAACGCT GGTAAACCGT CAGGTAACCG CAAGCCAAAC
AATGCTAAGC CTGCAGGAAA CAAACCGTCA GGTCAGCGCC GTAAGCCTCG TCCGCAAACT
GCAAACTAA
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| Protein sequence | MGFTSLGLSA PILKAIQEKG YDTPSPIQAK AIPAILEGKD VMAAAQTGTG KTAGFTLPIL
ERLSNGSRVR ANQVRALILT PTRELAAQVQ ENVFMYGRHL PLSSAVVFGG VKINPQMQRL
RKGADVLVAT PGRLMDLYNQ NAVKFDQLEV LVLDEADRML DMGFIRDIRK ILALLPKQRQ
NLLFSATFSD EIRDLAKGLV NNPVEISVNP ANSTARTVEQ SIYPADVKKK APMLVKLIKD
GDWKQVLVFT KTKHGANRLA KFLIEQNLPA AAIHGNKSQG ARTKALADFK SGEIRVLVAT
DIAARGIDIP QLPQVVNFEL PKVAEDYVHR IGRTGRAGEV GKAISLVCAL EASELFAIER
LIQEVLPRKE LEGFAPTNVV PESKLDTRPI KPKKPKKPKK PKAPNAAGEN APATEKKAGN
GANKPKRRFN GGNNGNKNST NQGGAGKPKS NSEGQGRTNS KPDDRKPNGN KPNGNKPNGN
KPNGSKSGNA GKPSGNRKPN NAKPAGNKPS GQRRKPRPQT AN
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