Gene VEA_000551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000551 
Symbol 
ID8558856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp648917 
End bp649831 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content45% 
IMG OID646408215 
Producttranscriptional regulator 
Protein accessionYP_003287702 
Protein GI262395849 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAACA ACATCAATTT GAATCTACTT AGATCCTTGC ATGTACTTTT AGAAGAGTGT 
CATGTCAGCC GAACTGCAGA GCGTTTGCAC ATTACGCAGT CTGCGGTTAG CCGACAGCTT
GCACAATTGC GCGATCTGTG TGGTGACCCA CTGCTTATTC GGCAAGGTAA TCAGCTGATA
CCAACCCCGC GAGCAATAGC ATTAAAATCA AAGCTTGATG CGTTACTGGC TGAGTTTGAC
CATTTACTCG ATGACAAACC TTTTGAGCCG CAACTGTGGC AAGGCGAGCT GGTTATTGCC
TCAAGCGATT ACGTGGCACA ATACGTTTTG CCCGATATTG CCTCTCACTT GGGTGAACAA
GCACCACAAT TGGATTTGGC GTATCGACTG TGGCAGCTAG ATTTTATCGA TAAGCTTCAC
GAGTTAGGAA TCCACCTTGC TTCTTCTATG TATCCCACTC AGCCTGAAGG TGTATCTAGC
ATCAATATTG GTTCTGATAA GTCAGTTTGT TTGATGAAGG CGTCTCACCC TTTAGCTGGT
AAGGCTTCGA TTTCTGTAGA GGACCTCATT AGTCATTCGC ATATTCAAGT GACGGGTGGG
GGAGACAAAG ACTCAAGTAC CGATATGGCA CTAAAAGACA GGGGGCTGAT GCGTCATGTT
ACCTTTAAAG TGCCTTTTTT CTCTGCGGCG GTAAATCGTT TGGTCTCAAG TGAGCACTTA
ATGGTAGTTC CGGAGCACAT TGCAAATAAT TTGGCCAAGC ACTGGCCTTT GGTTCATAAA
GTGCTTCCTT TTGAGACTCC TACCCATGAA TATTGGCTGA TGTGGCATCC TAAATACGAC
AATGATCCAG CTCATCAGTG GGTGCGAGAG CAAATCCACG CGGTGATGAA AATATCGGAA
TACTCCATTC ATTAG
 
Protein sequence
MLNNINLNLL RSLHVLLEEC HVSRTAERLH ITQSAVSRQL AQLRDLCGDP LLIRQGNQLI 
PTPRAIALKS KLDALLAEFD HLLDDKPFEP QLWQGELVIA SSDYVAQYVL PDIASHLGEQ
APQLDLAYRL WQLDFIDKLH ELGIHLASSM YPTQPEGVSS INIGSDKSVC LMKASHPLAG
KASISVEDLI SHSHIQVTGG GDKDSSTDMA LKDRGLMRHV TFKVPFFSAA VNRLVSSEHL
MVVPEHIANN LAKHWPLVHK VLPFETPTHE YWLMWHPKYD NDPAHQWVRE QIHAVMKISE
YSIH