Gene VEA_000539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000539 
Symbol 
ID8558844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand- 
Start bp639818 
End bp640468 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content48% 
IMG OID646408203 
Producthypothetical protein 
Protein accessionYP_003287690 
Protein GI262395837 
COG category[S] Function unknown 
COG ID[COG3132] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.755702 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTTG AGCTAACGGC AATTGAAGCA CGAGTCATTG GTTGCTTGAT CGAAAAAGAA 
GTCACCACCC CAGATCTTTA CCCCCTCAGC CTAAACGCAT TAACCAACGC GTGTAATCAA 
AAAAGCAACC GTGATCCCGT AATGTCGCTC TCTGAGTCAG ACGTTCTCGA TGCCGTTGAC 
GCTCTAATTG AGCGTAGGCT CGTCAGTGAC GAAAGTGCGT TTAACAGCCG TGTTAGCAAG 
TTTCAGCACC GTTTCTGTAA TACGGAGTTT GGTGATTTAA AACTGACAGA ACAAGAGAAA 
GGAATCGTGT GCTGTATGCT TTTGCGTGGT GCTCAAACGC CTGGGGAAAT TCGCACTCGT 
ACCAGTCGTC TCGCGACATT TCATGATGTA AAAGAAGTTG AAACGGTTCT GGAGCACTTA 
GCAAGCGAAG ACAAAGGGCC ATTAGTGGTC AAGTTACCGC GTGAAGCCGG AAAGCGAGAG 
TCACGCTATA TGCATTTGTT CTGTGGCGAC GTTGACGTCT CTGAGCTAGC AGTGCCAGTG 
TCAGCGGCTG GCTCTAATTC TGATCGAGTC AGCCAGCTAG AGCTCGAAGT TGCTCAGCTT 
AAAGAAGAGC TCGATGAACT TAAAGCTAAG GTCGAGTCAC TACTTTCATG A
 
Protein sequence
MKVELTAIEA RVIGCLIEKE VTTPDLYPLS LNALTNACNQ KSNRDPVMSL SESDVLDAVD 
ALIERRLVSD ESAFNSRVSK FQHRFCNTEF GDLKLTEQEK GIVCCMLLRG AQTPGEIRTR 
TSRLATFHDV KEVETVLEHL ASEDKGPLVV KLPREAGKRE SRYMHLFCGD VDVSELAVPV 
SAAGSNSDRV SQLELEVAQL KEELDELKAK VESLLS