| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000449 |
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| Symbol | |
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| ID | 8558755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 513677 |
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| End bp | 514195 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646408115 |
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| Product | Hcp protein |
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| Protein accession | YP_003287602 |
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| Protein GI | 262395749 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
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| TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000134513 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAACTC CAGCATATAT GTCTATCCAA GGTGAGACTC AAGGCCATAT TACTAAAGAT
ACTTACTCTG CAGATTCAGT AGGTAACACA TGGCAAGAAG CTCACGTTGA TGAGTTCCTA
GTACAAGAAC TTGATCACGT GCTAACAGTT CCACGTGATC CACAAAGTGG TCAGCCAACT
GGTCAACGTG TACACCGTCC ACTTGTTGTA ACTAAAGTTC AAGATCGCTC ATCTCCACTA
CTATTCAACG CACTAGTATC TGGCGAAAAA CTTCCTGAGT GTGTGATCCG CTTCTACCGC
ACTTCAGTTC AAGGTAAACA AGAGCACTAC TACTCAATCA AATTGATTGA TGCGCTACTT
GTCGATATCC AAACTCGTAT GAACCACTGT CAAGACGCAG CAACAGCTGA CCGCGTGACA
GAAGAAGTGC TTAAGTTCAC TTACCGTGCG ATCGAAGTAA CTCACGAAAA CTGCGGTACT
GCGGGTAACG ACGACTGGCG TGCTCCACGC GAAGCTTAA
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| Protein sequence | MPTPAYMSIQ GETQGHITKD TYSADSVGNT WQEAHVDEFL VQELDHVLTV PRDPQSGQPT
GQRVHRPLVV TKVQDRSSPL LFNALVSGEK LPECVIRFYR TSVQGKQEHY YSIKLIDALL
VDIQTRMNHC QDAATADRVT EEVLKFTYRA IEVTHENCGT AGNDDWRAPR EA
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