Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000437 |
Symbol | |
ID | 8558743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 498664 |
End bp | 499662 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 646408103 |
Product | uncharacterized protein ImpH/VasB |
Protein accession | YP_003287590 |
Protein GI | 262395737 |
COG category | [S] Function unknown |
COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.594996 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAATA CACTTTCTGA TAAGTCGAAT GAGTTTAGTT TCTATCAAGC AGTCTTGCTG CTAGAGAAGC ATTATCAATT AGAGCCGAAC TCTAACTTTG TCGCCGTCGG TGAGAACAAA TACTTCCACC AAGAACGTAT TGAGTTCAGC GTTTCGCCAA ACTTATCTTT TCCAAAGAGC GATATGGACT TTATTGCTCA TATGGAGAGA AATGGCCAGC AGTATTCTAG AGTCGAAACT AACTTTCTTG GCTTGCATGG TTCAAGCTCA CCACTTCCTG CTTCTTATAC TGAGAAACTG GCAGGGCGAG ATCCCGAAGA CAATCCGGTA AAAGATTTCT TTGATTTTTT CCATAATAGG TACACCAGTT TGTTGTATCG GGTTTGGAAG AAATACCGAT ATCACGTGCA GTACCAAAGC GGGGCAAGTG ATGCCTTCTC TGGACGTATT CTGCACTTGG CGGGCCTATC TAGCGTAATG CAAGATAGTA AGGTCGCAGA GTTAGATCGA GCGAAAATAC TGTCTTATGT AAACCAACTT TCTACGCGTA CGCGTTCGCC GAAGCTGATT TCCGGTATTG TTTCGCATTA CTTCTCGTTG CCTAGCGTGC GCATTGAAGA GTGGGTATAT CGCCGCGTAG AAATCGCAGA AAGCCAACGG AATAAACTCA ACCGTGCTAA TTGCATATTA GGGCAAAATT TGCACTTAGG ACAAAGTATT GCGGACTTAA ACGGCAAATT TAATCTTTGC ATCGACAGCA TCGATTTTGA AACATTTAAG CAGTTTTCCT ACGATGGTGA GTTACACAAA ACACTGGTTG GCCTGATGCG TTTCATTTTG CGTGACCCGA TGTCGTGGGA CTTAAAGTTG ACAGTTAACT TAGATAGTAT TCCAGAGAAT AAGCTAGGTA ATGGGGAAGG GAACCACTTA GGACAAACAT TCTGGTTAGG TAACCCAAGT GATAAAGATG CCAAAATCCG AGTCATCGGA AGCATATAA
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Protein sequence | MINTLSDKSN EFSFYQAVLL LEKHYQLEPN SNFVAVGENK YFHQERIEFS VSPNLSFPKS DMDFIAHMER NGQQYSRVET NFLGLHGSSS PLPASYTEKL AGRDPEDNPV KDFFDFFHNR YTSLLYRVWK KYRYHVQYQS GASDAFSGRI LHLAGLSSVM QDSKVAELDR AKILSYVNQL STRTRSPKLI SGIVSHYFSL PSVRIEEWVY RRVEIAESQR NKLNRANCIL GQNLHLGQSI ADLNGKFNLC IDSIDFETFK QFSYDGELHK TLVGLMRFIL RDPMSWDLKL TVNLDSIPEN KLGNGEGNHL GQTFWLGNPS DKDAKIRVIG SI
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