| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000419 |
|---|
| Symbol | |
|---|
| ID | 8558725 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | - |
|---|
| Start bp | 475900 |
|---|
| End bp | 476835 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 646408085 |
|---|
| Product | universal stress protein family 1 |
|---|
| Protein accession | YP_003287572 |
|---|
| Protein GI | 262395719 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGAT TCGCGAACAT ACTTTTTGCA ACACAAGGAT TGCCTGGTCA TAGTGAGGCG
CTCGAACAAG CGATGAGGAT CGCATCCAGC AACAAAGTAC CTGTTTCAGG GCTAATTGCG
TGCCCCGATT TCCCCGCGGA TATGCTCCAG TATCAGCAAA GTTATGAGCA ATCGCTACAA
GACTCCCTCA AACAAAGCAT TCAGGAATAC AGACAGAAGC TCGATCTTTC TGAAGATGAT
CTGGCATTTC CTCTTACTGT GAAAAGCAGT GAAAAACCCG CTGTCTGTAT TATTCAAGAA
GCATTAGCTG ACAACAAAGA TCTCATAATC AAAGAAGCTG AACCACTCGG TGAAGGCGCT
GAAGGTTTCA AAGCTATTGA TATGACACTG TTACGCAAAT GTCCTTGTCC ATTATGGTTA
CACCGACCGA TTGATAAGCC GAGAGACAAA CGCCGTGTGG CTGTTGCTAT AGATCCGTTA
ACGGCGAGCG ATGAACAGCA CTCATTAGCG GTGCGTTTAC TTGAATTATC TCGTTCAATA
GCCGACACCT GTGACAGTCG TTTACATGTG ATTTCTTGCT GGGAATATTA CTTAGAGAAT
TACCTACATG ACAATGCTTG GATTCAAGTC GACGATGCTG AGTTGAAACA TGAACTCGAC
AAAGCAAAAG CCGATCATAA ACAAGCTCTA CAACAACTGC TGGAAGAGTC GGGGATTACG
GGTGAAATTG TGATTCATCA TTTACACGGA AAGCCTGATG AAAAAATCCC GGATTACGTA
GAAAGCATAG AAGTGGACGT TCTAGTCATG GGTACCTTAG CGAGAACTGG GATATCTGGC
TACGTCATTG GTAATACGGC TGAAAACATT TTGCAATCTA TAAACTGTAG CTTGGTCGCT
CTTAAGCCCG ATGGTTTTGT ATCGCCGATT CAGTAA
|
|---|
| Protein sequence | MKRFANILFA TQGLPGHSEA LEQAMRIASS NKVPVSGLIA CPDFPADMLQ YQQSYEQSLQ
DSLKQSIQEY RQKLDLSEDD LAFPLTVKSS EKPAVCIIQE ALADNKDLII KEAEPLGEGA
EGFKAIDMTL LRKCPCPLWL HRPIDKPRDK RRVAVAIDPL TASDEQHSLA VRLLELSRSI
ADTCDSRLHV ISCWEYYLEN YLHDNAWIQV DDAELKHELD KAKADHKQAL QQLLEESGIT
GEIVIHHLHG KPDEKIPDYV ESIEVDVLVM GTLARTGISG YVIGNTAENI LQSINCSLVA
LKPDGFVSPI Q
|
|---|
| |