Gene VEA_000412 details

Gene Information

• Locus tag: VEA_000412
• ID: 8558718
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013457
• Strand: +
• Start bp: 469152
• End bp: 469859
• Gene Length: 708 bp
• Protein Length: 235 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 646408078
• Product: transcriptional regulator of succinyl CoA synthetase operon
• Protein accession: YP_003287565
• Protein GI: 262395712
• COG category: [K] Transcription
• COG ID: [COG2188] Transcriptional regulators

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACCCA AATACATAGA CATTGCGGAA CGATTAGAAA AAAAGATCAA AGATGGGGAA 
CTACAACCTA AATCGATGCT TCCAAAAGAG AGTGATTTGC AAGAAGAGTT TTCCGTAAGC 
CGCGTAACCA TCAGAAAAAG CTTACAAATT CTGGTCGACA ATAATTTAAT TAGTCGGACA 
AGAGGTAGTG GAACTTATGT AAACGATCTA AAAGCCCAAC ATGATGCCTT ACATTTGCTG 
GGTTTTATCG AGGAAGTCAG TAAACAGGGG AAAACTCCTA GCTCTCAAGT CATAAAGTTC 
GAACTTAAAA AGCCGAATGA GCAGGTTGCT AAGCAGTTAA ATCTCTCGCC CAATGATGAT 
ACATATGAAA TACATAGACT CAGATGTATT AATGATGAGC CTGAAATTTA CGAAGTCACT 
CATATGCCAG CAGTGTTATT TCCAGACTTG AGCATAGCCA TAATGAATGG TTCTAAATAT 
GAGTACATTG AAAATAGCAA AGGATTGAAA ATTGCGAAAA GCAGTCAGTC TGTCAAACCG 
TATTTGTTAG ATGCAGAGAC GGCCTCATAC CTGAATGAAT CAGAAGCTTC CCCTATTCTA 
AAAGTTGAGT CCACTGGTTA CCTAGAAGAT GGTCGTGCAT TTGAATATAC CGTCAATTAC 
TTCCGACTTC ATCAATACAG CTTCGAGTTT ATTTCAACTA GGACGTAG 

 

Protein sequence

MKPKYIDIAE RLEKKIKDGE LQPKSMLPKE SDLQEEFSVS RVTIRKSLQI LVDNNLISRT 
RGSGTYVNDL KAQHDALHLL GFIEEVSKQG KTPSSQVIKF ELKKPNEQVA KQLNLSPNDD 
TYEIHRLRCI NDEPEIYEVT HMPAVLFPDL SIAIMNGSKY EYIENSKGLK IAKSSQSVKP 
YLLDAETASY LNESEASPIL KVESTGYLED GRAFEYTVNY FRLHQYSFEF ISTRT