Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000403 |
Symbol | |
ID | 8558709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 457279 |
End bp | 459231 |
Gene Length | 1953 bp |
Protein Length | 650 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 646408069 |
Product | long-chain-fatty-acid--CoA ligase |
Protein accession | YP_003287556 |
Protein GI | 262395703 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.702328 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACAGC AACATAATGA TTGGGCAGAT ATAACCCGCT TAGATACCTT TCCAAAAGTG TTGCAGCACA ATGCCAAGCA CTGGCCCGAG CAAGTCGCAA TGCGTGAAAA GGAGTTTGGC ATTTGGCGAG AGTTCACTTG GCAAGATTAT GAAAATCGAG TGAAGTGGAT GGCTCTGGCA CTGCAAGATT TAGGTGTTGG TGAGCAAGAC GTTGTTGGTT TGCTGGGTGA TAACCGCCCG GAATGGGTAT GGGGCGAGTT GGCCGCACAT GCGATCAAAG GTTTCTCGCT GGGCATCTAT CAAGATTCCA TGCACGAAGA AGTGGCGTAC CTCATCAACT ATGCCAAAGC AAAAGTCGTG GTTGCCGAAG ATGAAGAGCA ATGCGATAAG CTACTTGAGC TCGGTGATGA GATCCCAAGC GTAGAATTCA TTATCTATTG TGACCCGCGT GGAATGCGCA AGTACGACGA TCCACGACTG ATTGATGTTG AGCAGGTCTA TAAAAAAGGT CAACTGATCG ACAAAGCGGA TCCGGATAAA TATCTCAATA TGGTTGAGGC AACCAAAGGC AGCGATCTTT CGATTCTTTG TACCACGTCG GGTACGACTT CCAAACCAAA GTTGGCTCAG CTACACAGCG GCACTTTCTT AGATCACTGT GCGGCTTATC TGCGTGCCGA CCCGCGCTCT CCAGGCGACA ACTACGTTTC TGTTCTGCCT TTGCCTTGGA TTATGGAGCA GGTGTATGTG GTTGGTCAGG CGTTGATTTC TCGTCAAATC GTTAACTTCG TGGAAGAACA AGAAACCATG ATGTCTGACT TGCGCGAAAT TGGCCCGAAC TTCGTCCTAC TTGCACCGCG TGTATGGGAA AACATTGTGG CAGACGTGTC TGCACGAATG ATGGATTCCA CACCGTTTAA GCAGAAGATG TACAAACTGG GCATGAGCTT AGCCAACAAA GCGCTGGAGC AGGGTAAACG CTCTAAGTTG GCTGAATGGA TTCTTCTGCG TGCTCTGCGT GACCGTTTAG GGTTTTCGAA CCTGACATCT GCGGCAACCG GCGGTGCGGC GATGGGACCG GATACTTTCC GTTACTTGCA AGCGATCGGT GTACCACTCA AGCAGCTTTA CGGTCAAACC GAAATGTGTG GTGCGTACAC CGTCCACCAA GCCGATGACG TGGACTATGA TTCGGTCGGC GTTGCGTTTG ATAATGCAGA AGTGAAAGTC ATCAACCCAG ACAGCAATGG CGTGGGTGAG ATCATCGCGA AAAGTACCGG CATGTTTACT GGCTACCTGA ACAACCAGGA AGCGTATGAC GAAGACGTAC AAGACGGATG GATGCATACG GGTGATGCGG GTTACTTTAA AGATTCTGGT CACTTGGTGG TGATTGATCG TCTGAAAGAC ATGTCGGAAA CCAGCCATGG CGACCGCTAC TCTCCGCAGT TCATTGAAAA CAAACTCAAG TTTTCGCCGT TTATTGCAGA AGCCGTAGTG GTGGGCAAAG GTCGACCTTG GCTATCCGCC ATCATCTGTA TTCGCTACGC GATTGTTGCG AAGTGGGCAG AGCAGCGAGG CTTAGCATTC ACTAACTACA CCAACTTATC TGCTCAACCA GAAGTGTATC AAGCTATTCG TGAAGAAGTG CTGAAAGTGA ACGAATCCCT ACCCGATGCA CAGAAGATCA GCAAATTCAT TCTACTTTAC AAAGAGCTAG ATGCCGACGA TGGCGAGCTA ACTCGCACAC GTAAAGTACG CCGTGGTGTG GTTGCAGAGA AATACGGAGA CATCATCGAA ACCATCTACA GTGACGATCC AAAAGTCGAT GTGGATACGG TGATCACTTA TCAGGATGGC ACCAAAACAC GCATTCAAAC GTCGCTAGTG ATTGAAACGC TTATTGAACA TGAGCCAACA CTAGTGGATA GCGAACAACG GAGGATCGCA TAG
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Protein sequence | MAQQHNDWAD ITRLDTFPKV LQHNAKHWPE QVAMREKEFG IWREFTWQDY ENRVKWMALA LQDLGVGEQD VVGLLGDNRP EWVWGELAAH AIKGFSLGIY QDSMHEEVAY LINYAKAKVV VAEDEEQCDK LLELGDEIPS VEFIIYCDPR GMRKYDDPRL IDVEQVYKKG QLIDKADPDK YLNMVEATKG SDLSILCTTS GTTSKPKLAQ LHSGTFLDHC AAYLRADPRS PGDNYVSVLP LPWIMEQVYV VGQALISRQI VNFVEEQETM MSDLREIGPN FVLLAPRVWE NIVADVSARM MDSTPFKQKM YKLGMSLANK ALEQGKRSKL AEWILLRALR DRLGFSNLTS AATGGAAMGP DTFRYLQAIG VPLKQLYGQT EMCGAYTVHQ ADDVDYDSVG VAFDNAEVKV INPDSNGVGE IIAKSTGMFT GYLNNQEAYD EDVQDGWMHT GDAGYFKDSG HLVVIDRLKD MSETSHGDRY SPQFIENKLK FSPFIAEAVV VGKGRPWLSA IICIRYAIVA KWAEQRGLAF TNYTNLSAQP EVYQAIREEV LKVNESLPDA QKISKFILLY KELDADDGEL TRTRKVRRGV VAEKYGDIIE TIYSDDPKVD VDTVITYQDG TKTRIQTSLV IETLIEHEPT LVDSEQRRIA
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