Gene VEA_000403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000403 
Symbol 
ID8558709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp457279 
End bp459231 
Gene Length1953 bp 
Protein Length650 aa 
Translation table11 
GC content49% 
IMG OID646408069 
Productlong-chain-fatty-acid--CoA ligase 
Protein accessionYP_003287556 
Protein GI262395703 
COG category[I] Lipid transport and metabolism 
COG ID[COG1022] Long-chain acyl-CoA synthetases (AMP-forming) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.702328 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACAGC AACATAATGA TTGGGCAGAT ATAACCCGCT TAGATACCTT TCCAAAAGTG 
TTGCAGCACA ATGCCAAGCA CTGGCCCGAG CAAGTCGCAA TGCGTGAAAA GGAGTTTGGC
ATTTGGCGAG AGTTCACTTG GCAAGATTAT GAAAATCGAG TGAAGTGGAT GGCTCTGGCA
CTGCAAGATT TAGGTGTTGG TGAGCAAGAC GTTGTTGGTT TGCTGGGTGA TAACCGCCCG
GAATGGGTAT GGGGCGAGTT GGCCGCACAT GCGATCAAAG GTTTCTCGCT GGGCATCTAT
CAAGATTCCA TGCACGAAGA AGTGGCGTAC CTCATCAACT ATGCCAAAGC AAAAGTCGTG
GTTGCCGAAG ATGAAGAGCA ATGCGATAAG CTACTTGAGC TCGGTGATGA GATCCCAAGC
GTAGAATTCA TTATCTATTG TGACCCGCGT GGAATGCGCA AGTACGACGA TCCACGACTG
ATTGATGTTG AGCAGGTCTA TAAAAAAGGT CAACTGATCG ACAAAGCGGA TCCGGATAAA
TATCTCAATA TGGTTGAGGC AACCAAAGGC AGCGATCTTT CGATTCTTTG TACCACGTCG
GGTACGACTT CCAAACCAAA GTTGGCTCAG CTACACAGCG GCACTTTCTT AGATCACTGT
GCGGCTTATC TGCGTGCCGA CCCGCGCTCT CCAGGCGACA ACTACGTTTC TGTTCTGCCT
TTGCCTTGGA TTATGGAGCA GGTGTATGTG GTTGGTCAGG CGTTGATTTC TCGTCAAATC
GTTAACTTCG TGGAAGAACA AGAAACCATG ATGTCTGACT TGCGCGAAAT TGGCCCGAAC
TTCGTCCTAC TTGCACCGCG TGTATGGGAA AACATTGTGG CAGACGTGTC TGCACGAATG
ATGGATTCCA CACCGTTTAA GCAGAAGATG TACAAACTGG GCATGAGCTT AGCCAACAAA
GCGCTGGAGC AGGGTAAACG CTCTAAGTTG GCTGAATGGA TTCTTCTGCG TGCTCTGCGT
GACCGTTTAG GGTTTTCGAA CCTGACATCT GCGGCAACCG GCGGTGCGGC GATGGGACCG
GATACTTTCC GTTACTTGCA AGCGATCGGT GTACCACTCA AGCAGCTTTA CGGTCAAACC
GAAATGTGTG GTGCGTACAC CGTCCACCAA GCCGATGACG TGGACTATGA TTCGGTCGGC
GTTGCGTTTG ATAATGCAGA AGTGAAAGTC ATCAACCCAG ACAGCAATGG CGTGGGTGAG
ATCATCGCGA AAAGTACCGG CATGTTTACT GGCTACCTGA ACAACCAGGA AGCGTATGAC
GAAGACGTAC AAGACGGATG GATGCATACG GGTGATGCGG GTTACTTTAA AGATTCTGGT
CACTTGGTGG TGATTGATCG TCTGAAAGAC ATGTCGGAAA CCAGCCATGG CGACCGCTAC
TCTCCGCAGT TCATTGAAAA CAAACTCAAG TTTTCGCCGT TTATTGCAGA AGCCGTAGTG
GTGGGCAAAG GTCGACCTTG GCTATCCGCC ATCATCTGTA TTCGCTACGC GATTGTTGCG
AAGTGGGCAG AGCAGCGAGG CTTAGCATTC ACTAACTACA CCAACTTATC TGCTCAACCA
GAAGTGTATC AAGCTATTCG TGAAGAAGTG CTGAAAGTGA ACGAATCCCT ACCCGATGCA
CAGAAGATCA GCAAATTCAT TCTACTTTAC AAAGAGCTAG ATGCCGACGA TGGCGAGCTA
ACTCGCACAC GTAAAGTACG CCGTGGTGTG GTTGCAGAGA AATACGGAGA CATCATCGAA
ACCATCTACA GTGACGATCC AAAAGTCGAT GTGGATACGG TGATCACTTA TCAGGATGGC
ACCAAAACAC GCATTCAAAC GTCGCTAGTG ATTGAAACGC TTATTGAACA TGAGCCAACA
CTAGTGGATA GCGAACAACG GAGGATCGCA TAG
 
Protein sequence
MAQQHNDWAD ITRLDTFPKV LQHNAKHWPE QVAMREKEFG IWREFTWQDY ENRVKWMALA 
LQDLGVGEQD VVGLLGDNRP EWVWGELAAH AIKGFSLGIY QDSMHEEVAY LINYAKAKVV
VAEDEEQCDK LLELGDEIPS VEFIIYCDPR GMRKYDDPRL IDVEQVYKKG QLIDKADPDK
YLNMVEATKG SDLSILCTTS GTTSKPKLAQ LHSGTFLDHC AAYLRADPRS PGDNYVSVLP
LPWIMEQVYV VGQALISRQI VNFVEEQETM MSDLREIGPN FVLLAPRVWE NIVADVSARM
MDSTPFKQKM YKLGMSLANK ALEQGKRSKL AEWILLRALR DRLGFSNLTS AATGGAAMGP
DTFRYLQAIG VPLKQLYGQT EMCGAYTVHQ ADDVDYDSVG VAFDNAEVKV INPDSNGVGE
IIAKSTGMFT GYLNNQEAYD EDVQDGWMHT GDAGYFKDSG HLVVIDRLKD MSETSHGDRY
SPQFIENKLK FSPFIAEAVV VGKGRPWLSA IICIRYAIVA KWAEQRGLAF TNYTNLSAQP
EVYQAIREEV LKVNESLPDA QKISKFILLY KELDADDGEL TRTRKVRRGV VAEKYGDIIE
TIYSDDPKVD VDTVITYQDG TKTRIQTSLV IETLIEHEPT LVDSEQRRIA