| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000401 |
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| Symbol | |
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| ID | 8558707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 455307 |
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| End bp | 456374 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646408067 |
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| Product | branched-chain amino acid transport system permease protein livM |
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| Protein accession | YP_003287554 |
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| Protein GI | 262395701 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.241122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCAAC TTAGCATGCG CCCATGTGGG GATTTTCGAA CCACATACAA AAGTGATACG
CCAATTTTTG AAACCAAAAC CATCAGAAGC CTTGCGATTG CTGGTGTTAT CGCCATGCTG
GCAGCACCGC TGGTCTTGGA TATTTACTTC CTCAACCTGT TTATTCAGAT TGCATACCTC
GGTATCGCGG CATTGGGCTT AAACATTCTG GTTGGTTTTA CAGGACAAAT CTCGCTAGGT
CACGGTGCGT TCTTTGGCTT TGGCGCCTTT GCATCGGCTT GGCTAAATAA CCAGTTCAAC
ATTCCAGTCG TGTTTGCGAT TCCGCTTGCG GGTTACTTAA CCATGATTGT CGGGATGCTC
TTTGGTCTGC CAGCTGCGCG AATTAAAGGC TTATACCTCG CGATTGCGAC TTTGGCTGCG
CAGTTTATTT TAGAGGACTT CTTTGCTCGC GCAGACTGGT TCAGTGGCGG CTCATATGGT
GCTGGTGCAA ACCCTATAAA TCTGTTTGGC TTTGAGTTTA CGACCGATGA AAGCTTCTTC
TACATTGCTC TGTTTGCGTT GATCTTTATG TACATGTGGG CATCGAACTT GATCCGTTCT
CGTGATGGTC GCGCGTTTGT CTCGGTACGA GATCACTACC TGTCGGCAGA AATCATGGGC
ATCAACCTAA CCAAATATCG TCTGCTCTCA TTTGGTGTGT GCGCATTCTA TGCGGGCATC
GGGGGCGCAC TCTACGGACA TTATCTAGGT TTTGTATCAG CAGAAGGTTT CACCATCATG
ATGTCTATCC AGTTCTTGGC AATGATCATC ATTGGTGGCT TGGGTTCCGT CAAAGGCACA
TTGATGGGCA CGATATTTAT CGTATTACTG CCAGAAGTGT TGGAGTTTGG CGTGACGGGG
TTGGCTGCGT TTAGCAATAA CACTTCGTTC GTTGATGGGC TTGCTTACTT CAAAGAAATG
GCGATCGGCT TGGTCATCAT GCTGTTCCTT ATTTTCGAAC CTCAAGGGTT ATCGCATCGC
TGGCAACAGA TTAGAGCATA TTGGAAACAC TATCCGTTCT CATATTAA
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| Protein sequence | MAQLSMRPCG DFRTTYKSDT PIFETKTIRS LAIAGVIAML AAPLVLDIYF LNLFIQIAYL
GIAALGLNIL VGFTGQISLG HGAFFGFGAF ASAWLNNQFN IPVVFAIPLA GYLTMIVGML
FGLPAARIKG LYLAIATLAA QFILEDFFAR ADWFSGGSYG AGANPINLFG FEFTTDESFF
YIALFALIFM YMWASNLIRS RDGRAFVSVR DHYLSAEIMG INLTKYRLLS FGVCAFYAGI
GGALYGHYLG FVSAEGFTIM MSIQFLAMII IGGLGSVKGT LMGTIFIVLL PEVLEFGVTG
LAAFSNNTSF VDGLAYFKEM AIGLVIMLFL IFEPQGLSHR WQQIRAYWKH YPFSY
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