| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000400 |
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| Symbol | |
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| ID | 8558706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 454017 |
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| End bp | 455261 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646408066 |
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| Product | ABC transporter substrate-binding protein |
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| Protein accession | YP_003287553 |
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| Protein GI | 262395700 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAAG GACATTTAGC GACAACGTTG GTGCTATCTT CGGCACTGTT TACTACCGCC
ACTTGGGCAA AAGACTCTGT ATTTGTCGGG CAATTGGTCG ACTTTTCTGG ACCAACAGCC
TACGTGAGTA AGCCTTATGG TTCTGGCGTG CGAGACGCAT TACGCTGGAT CAACCAAAAC
GGTGGCATTA ACGGTACTGA GCTCGAATTT GAAACGGTAG ATATGGCGTA TAAAGTGCCA
GTAGCCATTT CCAACTACAA ACGTTGGGTG GCGCGTAAAG ACATGGTTGC GCTACAAGGT
TGGGGTACGG CAGATACCGA AGCTCTCATC TCGTTTGTGA CCAAAGACAA AGTGCCAGTG
TTCTCTGCCT CTTATTCAGG TCACTTAACC GACCCAACCG GCAAGAACCC AAAAACTGCG
AAACCAGCAC CTTATAACTT CTTCTATGGC GCGTCGTACT CAGATGCGTG TCGTGCACTA
GTGAAGTGGG CGAAAGAAGA TTGGGAATCA AAGGGCAACC AAGGTGCGCC AAAATTTACC
CACATTGGTG ATAACCACCC ATTCCCGAAT GCGCCAAAAG AAGCGTGTGC AGAATATGCT
GAAGAGCTTG GTTTTGAGGT GCAAAACCCA GTGGTTGTGT CACTCAAACC GGGGGACTTC
AAAGCACAAT GTCTGTCACT GAAAGAGTCT GGCACTAACT ACGGTTACAT TGCCAATATC
GGTAGCTCGG TTATCTCACT AGTGAAGTCT TGTAACACGG TTGGGACAGA GTTCCAGTAC
ATGGCAAACA TTTGGGGCGG TGACAAGCCA GTGCTTGAAG CGGCGGGTGA CGGCCTTAAA
GACTACGTTT TCCCTGGCAT GACGGCGTTT TGGGGAGACG ATAACGAAGG CATGAAACTG
GTTCGTGAGA TTTCTAAGCA GTCTGAATCA GAGCCTGGTG AGTTTAGAAC TCACCACTAC
ATTCGCGGCA TTTGTTCTGC GTTCTACATG AAAGAAGCGA TGGAGTGGGC AAAAGACAAC
GGTGGCATCA CGGGTGAAAA CATCAAGAAG GGCATGTATG TCCATGACAA CTGGGTCCCA
CAAGGCTTAG AAGGTGTTTG TGTACCTGCG AACTGGAAAC CGGAAGATCA CCGTGGCACA
ACAACCGTGA ACGTGTTTAT GGGTAACAAC AACGGCGGCG CAGTAGATAT TAAGAAAGTA
TCTCAGGTGA CATTGTCACG TCGTGACGAT TGGCTAGGTT ACTAA
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| Protein sequence | MNKGHLATTL VLSSALFTTA TWAKDSVFVG QLVDFSGPTA YVSKPYGSGV RDALRWINQN
GGINGTELEF ETVDMAYKVP VAISNYKRWV ARKDMVALQG WGTADTEALI SFVTKDKVPV
FSASYSGHLT DPTGKNPKTA KPAPYNFFYG ASYSDACRAL VKWAKEDWES KGNQGAPKFT
HIGDNHPFPN APKEACAEYA EELGFEVQNP VVVSLKPGDF KAQCLSLKES GTNYGYIANI
GSSVISLVKS CNTVGTEFQY MANIWGGDKP VLEAAGDGLK DYVFPGMTAF WGDDNEGMKL
VREISKQSES EPGEFRTHHY IRGICSAFYM KEAMEWAKDN GGITGENIKK GMYVHDNWVP
QGLEGVCVPA NWKPEDHRGT TTVNVFMGNN NGGAVDIKKV SQVTLSRRDD WLGY
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