| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000394 |
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| Symbol | |
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| ID | 8558700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 446559 |
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| End bp | 448262 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646408060 |
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| Product | acetolactate synthase catabolic |
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| Protein accession | YP_003287547 |
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| Protein GI | 262395694 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | [TIGR02418] acetolactate synthase, catabolic |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000407166 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATCCA AACCTTCAAA TAAAAATGGA GCTCAGTTGA TCGCTCAACA GCTAGAGTCT
CTCGGCATTA AGTACATTTT CGGTATTCCC GGTGCAAAAA TCGATCGACT GTTCGATGCA
ATTGAAGACA CTAACATCCA AATGATTCCG GTACGTCACG AGGCTAACGG CGCGTTTATG
GCGGGCGTTA TGGGAAGACT AACCGGCAAA GCAGGCGTTA CAATGGTTAC GTCAGGTCCA
GGCTGTGGAA ACCTAGTTAC GGGGGTGGCA ACAGCAAACT CCGAAGGCGA TCCGCTGATT
GCTATCGGTG GTGCGGTGAA ACGAACTGAC CAGCAAAAAC AAACACACCA GAGCATGGAT
ACCGTCAGTA TTTTTCGCTC TATAACCAAA TTCAGTGCTG AAGTGCAGCA TGTGGACGCC
GCAAGCGAGA TCATGGCGAA CGCATTTCGT ATCGCAGAGT CAGGTCGTCC TGGGGCTTGC
TTTTTGAGTC TCCCCCAAGA TGTTTTATCC GAGCAAACCC AAACGGACAT TATTGTCCCC
TCGCCTTACA CACAGCCTGG TTGCGCAGAC ATCGCAGCAA TCGAAGAAGC GGTCAGTCGA
ATCAGCAAAG CAAAGCGTTG TGTGGTTTTA CTTGGCCTTC ACGCGAGCCG CAGCCAAAAC
GCTGCTGCTA TCGCCCGATT TCTTCAAAAT ACGCAGCTAC CCGTTGTCGG CACTTACCAA
GCCGCCGGCA CGGTAGACAT CAATTACTAT CATCACTTTG CTGGGCGTGT CGGTTTGTTT
AATAACCAAC CTGGCGATGT TTTACTGCGG GACGCCGATT TAATTCTCAC CATCGGCTTT
AGCCCAATAG AGTATGACCC TGAGCTTTGG AACAGCCACC GCAACCCAGT GATTCACCTC
GATATTGAAC CGGCAGAATA CCAACTTAAT TATCAGCCTT GTGTTGAAAT CGTCGGAAAC
ATTGCGCAGT CATTAGACAA GATGGGCAGC TATATATCTG AATATGCTCG TCTTTCCCCA
ACAGCACTTT CAGTACTAGA AGAGGTAGCA CTGCAACGGC AAGTGATCAA AACCTATCCC
AATGTCTATA ACAAGCAAGG ATTTCATCCA CTGGCACTGA TTAAAGCCAT GCAATCTATC
ATCACACCAG ATACCACGCT ATGTCTTGAT ATGGGGAGCT TCCACATCTG GATCGCTCGT
TACTTAAGTT GTTTTCGAGC TCGCCAAATG CTGGTGTCTA ACGGCCAACA AACGATGGGC
GTTGCACTGC CATGGGCCAT TGGTGCCAGC CTACTAAAAC CTGGTAGTAA AGTGGTATCG
ATATCGGGAG ACGGCGGTTT TATGCAATCG AGCATGGAGT TAGAAACCGC GGTTAGACTG
AACTGCAATA TCGTCCATAT TGTGTGGGTT GATAACGCCT ACAACATGGT AGAAATGCAA
GAGTTCAACA AATATCAGCG CTGCTCTGGT GTGAAATTTG GACCAATTGA TTTCAAGGCG
TATGCCGAAT CATTTGGCGC GAAAGGCTTC GCAGTGACTA GTCAACACGA ATTGCTACCG
ACATTGAATA AAGCCATGGA CGTTGAAGGA CCAGCAGTGG TGGCTATCCC CGTAGATTAC
AGCGACAACG ACAAACTGAT GTTGCCGCGC ACAGAGAAAA ATCAAGATCC CGTTTTTGTA
AGTTTCGAAG GAGAAATCGC ATGA
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| Protein sequence | MQSKPSNKNG AQLIAQQLES LGIKYIFGIP GAKIDRLFDA IEDTNIQMIP VRHEANGAFM
AGVMGRLTGK AGVTMVTSGP GCGNLVTGVA TANSEGDPLI AIGGAVKRTD QQKQTHQSMD
TVSIFRSITK FSAEVQHVDA ASEIMANAFR IAESGRPGAC FLSLPQDVLS EQTQTDIIVP
SPYTQPGCAD IAAIEEAVSR ISKAKRCVVL LGLHASRSQN AAAIARFLQN TQLPVVGTYQ
AAGTVDINYY HHFAGRVGLF NNQPGDVLLR DADLILTIGF SPIEYDPELW NSHRNPVIHL
DIEPAEYQLN YQPCVEIVGN IAQSLDKMGS YISEYARLSP TALSVLEEVA LQRQVIKTYP
NVYNKQGFHP LALIKAMQSI ITPDTTLCLD MGSFHIWIAR YLSCFRARQM LVSNGQQTMG
VALPWAIGAS LLKPGSKVVS ISGDGGFMQS SMELETAVRL NCNIVHIVWV DNAYNMVEMQ
EFNKYQRCSG VKFGPIDFKA YAESFGAKGF AVTSQHELLP TLNKAMDVEG PAVVAIPVDY
SDNDKLMLPR TEKNQDPVFV SFEGEIA
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