Gene VEA_000337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000337 
Symbol 
ID8558642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp380040 
End bp381062 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content46% 
IMG OID646408002 
Productribose operon repressor 
Protein accessionYP_003287490 
Protein GI262395637 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACGA TGAAAGACAT CGCAAAACTG GCAGGGGTTT CCACTTCAAC AGTGAGCCAT 
GTTATTAACA AGACGCGTTT TGTGAGTGAA GAGATCTCCG AACGCGTCAA TAATGCCGCA
AAAGAACTCA ACTACTATGC GCCATCAGCT TTGGCGCGTA GCCTCAAAGT CAATCGTACC
AAAACCATCG GTATGCTAGT GACAACCTCA ACCAACCCAT TCTTTGGCGA AGTCGTAAAA
GGCGTCGAAC GCAGCTGCTA CCAAAAAGGC TACAGCCTCA TTTTATGCAA TACCGAAGGT
GATAACGAAC GTATGCGCCA ATCCATTAAT ACGCTTTTGC AAAAGCGTGT CGATGGTTTG
ATCTTGATGT GCTCCTCGCT AGAAGGGGAG CGTATCGATG TATTTGAGCG TTATCCTGAT
ATCCCTGTCG TGGTGATGGA TTGGGGGCCG ATGCTGTTTA CGAGCGACAA AATTCAAGAT
AACTCGCTTC GTGGCGGTTA CCTAGCGGCG AAATACTTGA TTGATTGCGG CCACACAGAA
ATAGGATGTA TCACCGGCCC TTTGATTAAA CACCAAGCGC AAATGCGATA CGAAGGTTAC
AAACGTGCGA TGAACGAAGC AGGCTTGGAA TTTAATGCCA ACTGGATAAT TGAATCGGAC
TTCGAATGTG AAGGCGGATA CCAAGCATTT ATGAAAATGG CGCAGCGAGG CACCTTACCC
AGCTCGATTT TCGTTTCCAA TGATATGATG GCGATGGGGG TGATTAACGC CGCAAATGAG
CTCAATATTA AAGTCCCGGA ACAGATTTCA ATCATCGGTT ACGATGACAT ACATATCGCG
AAGTTCATGT CGCCATCACT CACCACAATT CACCAGCCTA AATACCGTCT TGGGCAAGCT
GCCGTGGAAA CGCTTGTCCG AAAATTGGAT GATAAATCAA CAGAAGCGCA AGTCGTGCAA
TTAGAACCTA CCTTAGTTGA ACGAAAAAGT GTCAAGATAT TAAAGTCAAG CAGCACTAGA
TGA
 
Protein sequence
MATMKDIAKL AGVSTSTVSH VINKTRFVSE EISERVNNAA KELNYYAPSA LARSLKVNRT 
KTIGMLVTTS TNPFFGEVVK GVERSCYQKG YSLILCNTEG DNERMRQSIN TLLQKRVDGL
ILMCSSLEGE RIDVFERYPD IPVVVMDWGP MLFTSDKIQD NSLRGGYLAA KYLIDCGHTE
IGCITGPLIK HQAQMRYEGY KRAMNEAGLE FNANWIIESD FECEGGYQAF MKMAQRGTLP
SSIFVSNDMM AMGVINAANE LNIKVPEQIS IIGYDDIHIA KFMSPSLTTI HQPKYRLGQA
AVETLVRKLD DKSTEAQVVQ LEPTLVERKS VKILKSSSTR