| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000249 |
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| Symbol | |
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| ID | 8558554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 270679 |
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| End bp | 271185 |
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| Gene Length | 507 bp |
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| Protein Length | 168 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646407914 |
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| Product | peptide deformylase |
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| Protein accession | YP_003287402 |
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| Protein GI | 262395549 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGTCC TCGAAATTCT CTCCATTCCA GACCCAAGGC TTAAAGTAAA AGCAGAAAAA
GTCACTGATG TATCGACAGT ACAAACGTTG ATCGACGATA TGCTAGAAAC ACTTTACGCA
ACGGGCAATG GCATCGGTTT AGCTTCAACC CAAGTGGGCA GAAAAGAAGC GGTTGTTGTC
ATCGATATCT CTGACGAACG TAATGATCCT TTAATCTTAG TTAACCCAGA AGTGGTGAGC
GGAGAAAACA AAGCACTTGG TCAAGAAGGG TGCCTATCTG TTCCCGAATA CTATGCCGAT
GTAGAGCGTT ACACATCAGT TGTTGTGTCT GCATTGGACC GTGATGGCAA CCCGATGACA
ATCGAGAGCG ATGAGTTCTT AGCGATTGTG ATGCAGCACG AAATCGATCA CCTATCTGGT
AACTTGTTCA TTGATTACCT TTCACCGTTA AAGCAAAAAA TGGCGATGAA AAAAGTGAAG
AAGTACGTAA AAGCGCAAGC TAAGTAA
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| Protein sequence | MAVLEILSIP DPRLKVKAEK VTDVSTVQTL IDDMLETLYA TGNGIGLAST QVGRKEAVVV
IDISDERNDP LILVNPEVVS GENKALGQEG CLSVPEYYAD VERYTSVVVS ALDRDGNPMT
IESDEFLAIV MQHEIDHLSG NLFIDYLSPL KQKMAMKKVK KYVKAQAK
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