Gene VEA_000221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000221 
Symbol 
ID8558526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp238748 
End bp239728 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content46% 
IMG OID646407886 
Productfructose repressor FruR LacI family 
Protein accessionYP_003287374 
Protein GI262395521 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID[TIGR02417] D-fructose-responsive transcription factor 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACTGG ATGAAATAGC CAAATTAGCA GGCGTTTCTA AGACAACTGC AAGCTATGTG 
ATTAACGGAA AAGCGCAGAA ATACCGCATC AGCGAGAAGA CTCAGAAGAA AGTGATGGCC
GTTGTAGAAG AATACAATTA TAAGCCAGAT CATGCGGCGT CTTCTTTGCG AGCAGGTAAT
TCACGCTCAT TTGGGCTTAT CATCCCAGAC TTAGAAAACA CCAGTTATGC GCGTCTTGCA
AAACTGATTG AACAAAACTC GCGTAAAGCA GGGTACCAAA TTTTAATTGG CTGCTCTGAT
GATGATCCTG ATACAGAGCA AAAGGTGGCG GAAGCGTTAG TCAGTCGTCG CATTGATGCG
TTGTTTGTGG CAAGTGGTAT GCCCACTGCA AACGAGTATT ATCTTAAGTT GCAAAATTCT
GGTACGCCAG TTATCGCGCT AGACCGCCCA ATGGATGATG AGCACTTTTG TTGTGTCATC
AGCGAAGATT TTGACGCCGC ACTTGAACTC ACTCAGTCAG TACTGTCCGA GGATATAAAG
TCCATTGGCT TAATCGGCGC ATTGCAAGAT CTTCAAGTTT CAAAAGAGCG TGAGCTCGGT
TTTCGATCCG CTTCTCAACA AGGTGGCAAA ACGGCAACAG TGGGTTATGG GCAGCACTTC
TCCCGAGAAG AAGGTAAGAA AGTCTTAGAG AGATGGCTAG CAGAGAACGA GCTGCCAGAT
GCTATTGTCA CAACGTCATA CACACTGTTA GAAGGTGTGT TGGATGTGAT GCTCGAAAAG
CCAGAACTCA TGAGCAAAGT TCGCCTAGCG ACGTTTGGTG ATAATCGACT GCTGGACTTC
TTGCCAGTGA AAATCAACTC TTTACCTCAA CAATTTGAGT TGATCGCGGA CAGCGCAATG
GAGTTAGCGC TCAACGCTTC CGCCAAACGT TATAAACCGG GTGTTGAGTT GATTCCACGT
AAAATTGTTA AACGTCACTA A
 
Protein sequence
MTLDEIAKLA GVSKTTASYV INGKAQKYRI SEKTQKKVMA VVEEYNYKPD HAASSLRAGN 
SRSFGLIIPD LENTSYARLA KLIEQNSRKA GYQILIGCSD DDPDTEQKVA EALVSRRIDA
LFVASGMPTA NEYYLKLQNS GTPVIALDRP MDDEHFCCVI SEDFDAALEL TQSVLSEDIK
SIGLIGALQD LQVSKERELG FRSASQQGGK TATVGYGQHF SREEGKKVLE RWLAENELPD
AIVTTSYTLL EGVLDVMLEK PELMSKVRLA TFGDNRLLDF LPVKINSLPQ QFELIADSAM
ELALNASAKR YKPGVELIPR KIVKRH