Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000221 |
Symbol | |
ID | 8558526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 238748 |
End bp | 239728 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 646407886 |
Product | fructose repressor FruR LacI family |
Protein accession | YP_003287374 |
Protein GI | 262395521 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | [TIGR02417] D-fructose-responsive transcription factor |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACTGG ATGAAATAGC CAAATTAGCA GGCGTTTCTA AGACAACTGC AAGCTATGTG ATTAACGGAA AAGCGCAGAA ATACCGCATC AGCGAGAAGA CTCAGAAGAA AGTGATGGCC GTTGTAGAAG AATACAATTA TAAGCCAGAT CATGCGGCGT CTTCTTTGCG AGCAGGTAAT TCACGCTCAT TTGGGCTTAT CATCCCAGAC TTAGAAAACA CCAGTTATGC GCGTCTTGCA AAACTGATTG AACAAAACTC GCGTAAAGCA GGGTACCAAA TTTTAATTGG CTGCTCTGAT GATGATCCTG ATACAGAGCA AAAGGTGGCG GAAGCGTTAG TCAGTCGTCG CATTGATGCG TTGTTTGTGG CAAGTGGTAT GCCCACTGCA AACGAGTATT ATCTTAAGTT GCAAAATTCT GGTACGCCAG TTATCGCGCT AGACCGCCCA ATGGATGATG AGCACTTTTG TTGTGTCATC AGCGAAGATT TTGACGCCGC ACTTGAACTC ACTCAGTCAG TACTGTCCGA GGATATAAAG TCCATTGGCT TAATCGGCGC ATTGCAAGAT CTTCAAGTTT CAAAAGAGCG TGAGCTCGGT TTTCGATCCG CTTCTCAACA AGGTGGCAAA ACGGCAACAG TGGGTTATGG GCAGCACTTC TCCCGAGAAG AAGGTAAGAA AGTCTTAGAG AGATGGCTAG CAGAGAACGA GCTGCCAGAT GCTATTGTCA CAACGTCATA CACACTGTTA GAAGGTGTGT TGGATGTGAT GCTCGAAAAG CCAGAACTCA TGAGCAAAGT TCGCCTAGCG ACGTTTGGTG ATAATCGACT GCTGGACTTC TTGCCAGTGA AAATCAACTC TTTACCTCAA CAATTTGAGT TGATCGCGGA CAGCGCAATG GAGTTAGCGC TCAACGCTTC CGCCAAACGT TATAAACCGG GTGTTGAGTT GATTCCACGT AAAATTGTTA AACGTCACTA A
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Protein sequence | MTLDEIAKLA GVSKTTASYV INGKAQKYRI SEKTQKKVMA VVEEYNYKPD HAASSLRAGN SRSFGLIIPD LENTSYARLA KLIEQNSRKA GYQILIGCSD DDPDTEQKVA EALVSRRIDA LFVASGMPTA NEYYLKLQNS GTPVIALDRP MDDEHFCCVI SEDFDAALEL TQSVLSEDIK SIGLIGALQD LQVSKERELG FRSASQQGGK TATVGYGQHF SREEGKKVLE RWLAENELPD AIVTTSYTLL EGVLDVMLEK PELMSKVRLA TFGDNRLLDF LPVKINSLPQ QFELIADSAM ELALNASAKR YKPGVELIPR KIVKRH
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