Gene VEA_000218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000218 
Symbol 
ID8558523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp236103 
End bp236921 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content44% 
IMG OID646407883 
Productdiguanylate phosphodiesterase 
Protein accessionYP_003287371 
Protein GI262395518 
COG category[T] Signal transduction mechanisms 
COG ID[COG2200] FOG: EAL domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTTAA AGAATCAATC GGACTACGAG CGATACATTA AGCAAGATAA TCTTGGTGAA 
TATTACGTAG TTCTCAATCA ATTCACTTTT CACAGTGTTT ATCAGCCGAT TTTTGATAAG
CACCAGCGTA TTATTGGAAT GGAAGCTCTA CTGCGAATTC GTGGCATTGA TGGTTCGTTA
ATTCGTCCTG ATGTATTTCT GGCCAACAAT GGCCTCGATC CCTACTTTCG ATTGTGTGTT
GAGTTTTTAT CCAGAGCAAT GCACATTCGA AATTTTGCAC GCTGTTTCGC AGGAACGCCT
ATCAAACTGT TTCTCAATGT CATGCCTCAA ACCCTACTCA CCCTAACCAA AGACATGGGC
TTTAAAGACA ACGGCCTGCT TTACAAGCGC CTTTCCGACC TTGGTATGAG CCCATCAGAC
GTGGTGTTTG AAGTAGTCGA AGAGTCCTGC GGTGATACTG ATTTACTGAT CAAAGCCGTG
CAGTTAATGA GAGCGAATGG CTTTATCTTT GCTATCGATG ATTTTGGCGC TCAACATTCT
GATATCGCAC GTGTTCAGCA GCTCTGCCCT GACATCATAA AAATCGATCG CTCTTATCTA
CTTGATTACT GCGCCGGAGA AACCTTTTCC ATACATAGCG CCGTTGAGCT CGCGGCTCAT
ATGGGAGCAA AAGTGATCAT AGAAGGGGTA GAAGAAGACG TGCAGCTGCA AGCGATGTAT
CAACTTGATT TGGATTATTA CCAAGGCTTT TACTTAGGTA AGCCTTGCGC CATTCATCAC
TGGACCGATA GCCTAAACAT TGAAACGACA GTGCATTGA
 
Protein sequence
MELKNQSDYE RYIKQDNLGE YYVVLNQFTF HSVYQPIFDK HQRIIGMEAL LRIRGIDGSL 
IRPDVFLANN GLDPYFRLCV EFLSRAMHIR NFARCFAGTP IKLFLNVMPQ TLLTLTKDMG
FKDNGLLYKR LSDLGMSPSD VVFEVVEESC GDTDLLIKAV QLMRANGFIF AIDDFGAQHS
DIARVQQLCP DIIKIDRSYL LDYCAGETFS IHSAVELAAH MGAKVIIEGV EEDVQLQAMY
QLDLDYYQGF YLGKPCAIHH WTDSLNIETT VH