Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000218 |
Symbol | |
ID | 8558523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | + |
Start bp | 236103 |
End bp | 236921 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 646407883 |
Product | diguanylate phosphodiesterase |
Protein accession | YP_003287371 |
Protein GI | 262395518 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGTTAA AGAATCAATC GGACTACGAG CGATACATTA AGCAAGATAA TCTTGGTGAA TATTACGTAG TTCTCAATCA ATTCACTTTT CACAGTGTTT ATCAGCCGAT TTTTGATAAG CACCAGCGTA TTATTGGAAT GGAAGCTCTA CTGCGAATTC GTGGCATTGA TGGTTCGTTA ATTCGTCCTG ATGTATTTCT GGCCAACAAT GGCCTCGATC CCTACTTTCG ATTGTGTGTT GAGTTTTTAT CCAGAGCAAT GCACATTCGA AATTTTGCAC GCTGTTTCGC AGGAACGCCT ATCAAACTGT TTCTCAATGT CATGCCTCAA ACCCTACTCA CCCTAACCAA AGACATGGGC TTTAAAGACA ACGGCCTGCT TTACAAGCGC CTTTCCGACC TTGGTATGAG CCCATCAGAC GTGGTGTTTG AAGTAGTCGA AGAGTCCTGC GGTGATACTG ATTTACTGAT CAAAGCCGTG CAGTTAATGA GAGCGAATGG CTTTATCTTT GCTATCGATG ATTTTGGCGC TCAACATTCT GATATCGCAC GTGTTCAGCA GCTCTGCCCT GACATCATAA AAATCGATCG CTCTTATCTA CTTGATTACT GCGCCGGAGA AACCTTTTCC ATACATAGCG CCGTTGAGCT CGCGGCTCAT ATGGGAGCAA AAGTGATCAT AGAAGGGGTA GAAGAAGACG TGCAGCTGCA AGCGATGTAT CAACTTGATT TGGATTATTA CCAAGGCTTT TACTTAGGTA AGCCTTGCGC CATTCATCAC TGGACCGATA GCCTAAACAT TGAAACGACA GTGCATTGA
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Protein sequence | MELKNQSDYE RYIKQDNLGE YYVVLNQFTF HSVYQPIFDK HQRIIGMEAL LRIRGIDGSL IRPDVFLANN GLDPYFRLCV EFLSRAMHIR NFARCFAGTP IKLFLNVMPQ TLLTLTKDMG FKDNGLLYKR LSDLGMSPSD VVFEVVEESC GDTDLLIKAV QLMRANGFIF AIDDFGAQHS DIARVQQLCP DIIKIDRSYL LDYCAGETFS IHSAVELAAH MGAKVIIEGV EEDVQLQAMY QLDLDYYQGF YLGKPCAIHH WTDSLNIETT VH
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