Gene VEA_000108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000108 
Symbol 
ID8558413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand+ 
Start bp124712 
End bp125182 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content46% 
IMG OID646407773 
Productribonucleotide reductase of class III (anaerobic) activating protein 
Protein accessionYP_003287261 
Protein GI262395408 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0602] Organic radical activating enzymes 
TIGRFAM ID[TIGR02491] anaerobic ribonucleoside-triphosphate reductase activating protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.31711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTACC ACCAATATTA TCCAATTGAC GTTGTTAACG GACCGGGTAC GCGCTGCACA 
TTGTTTGTGT CGGGGTGCGT ACATCAGTGT CGTGGCTGTT ATAACCAGTC GACGCAACGC 
TTGGATTCGG GTGTGTTGTT CACGCAAGAA GCGGAAGACA AAATCATCAA TGACTTGAAT 
GACACGCGCA TTAAACGTCG AGGTTTGTCG TTGTCGGGCG GAGATCCGCT TCATCCTGCT 
AATGTGCCTC ATATTTTAAA GATCGTGAAA AGGGTGAGAG AAGAGTGTCC CGGTAAAGAC 
ATCTGGGTTT GGACAGGCTA CACGCTGGCT GAACTGGATG ACGCGCAAAG AGAAGTGGTG 
CAATACATCG ATGTTTTGAT TGATGGTAAG TTTGAACAAG ACAAGAAAGA TCTCAATCTC 
GAATGGCGTG GCAGTTCAAA CCAAATCATT CATCGCTTTA CGGATATTTA A
 
Protein sequence
MNYHQYYPID VVNGPGTRCT LFVSGCVHQC RGCYNQSTQR LDSGVLFTQE AEDKIINDLN 
DTRIKRRGLS LSGGDPLHPA NVPHILKIVK RVREECPGKD IWVWTGYTLA ELDDAQREVV 
QYIDVLIDGK FEQDKKDLNL EWRGSSNQII HRFTDI