| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000107 |
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| Symbol | |
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| ID | 8558412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 122507 |
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| End bp | 124627 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646407772 |
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| Product | ribonucleotide reductase of class III (anaerobic) large subunit |
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| Protein accession | YP_003287260 |
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| Protein GI | 262395407 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
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| TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.185061 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAACCAA TCGTAATCAA GCGTGACGGC TCAAGAGCTC CGTTCAACAG GGATCGTATC
CAAGCAGCAG TTGAAGCGGC AGCGGAAAAC AAAGATAAAG ATGTCGCCAT TTATGCTCTT
AATGTCGCTC TTGCTGTCGA GTTACAGCTA AAAGATCACG ATGAAGTTCA CATCCATGAG
ATTCAAGACT TAGTCGAGAA TGAACTCATG CAAGGTCCTT ACAAAGCCCT AGCACGTTCT
TACATTGAAT ACCGCCATGA CCGCGACATC GCGCGTGAAA AGCAAAGTGC ACTAACTCGT
GAAATCGAAG GTTTGATTGA AGAAAGTAAC CTTGATTTGA TCAACGAAAA CGCGAACAAA
GACGGCAAAG TTATCCCAAC TCAGCGTGAC CTTTTAGCGG GTATCGTGGC GAAGCACTAC
GCGAAAACGC ACATCCTGCC TCGTGATGTG GTTCAAGCAC ACGAAGTGGG TGACATTCAC
TACCACGATC TGGATTACGC GCCATTCTTC CCGATGTTTA ACTGTATGCT TATCGATTTG
AAAGGCATGC TAACGCACGG CTTCAAAATG GGTAATGCAG AAATCGACAC GCCTAAATCG
ATTTCAACTG CGACTGCCGT AACGGCGCAA ATTATTGCTC AAGTGGCTAG CCATATTTAT
GGCGGTACAA CTATCAACCG TATTGACGAA GTGTTAGAAC CTTACGTCAT CACGAGCTAT
GAAAAGCATT TAGAAATCGC GAAAGAGTGG AACATTGCTG AGCCAGAAGA GTTTGCTAAA
GCGCGCACAG AGAAAGAGTG TTACGACGCA TTCCAATCTC TGGAATACGA AGTAAACACA
TTGCACACGG CGAACGGGCA AACCCCATTC GTAACGTTTG GTTTTGGTCT TGGTACAAGC
TGGGCGTCTC GTCTTATTCA GCAATCTATT TTGAAAAACC GTATCGCTGG TCTTGGCAAA
AACCGTAAAA CCGCCGTATT CCCTAAATTG GTGTTCGGTA TTAAAGACGG TCTAAACCAC
AAGGCAGAAG ATCCTAACTA CGACATTAAG AAGCTTGCAC TTGAGTGTGC TTCAAAACGT
ATGTACCCAG ACATTCTTAA CTACGACAAA GTCGTGGAAG TAACGGGGTC ATTCAAAACA
CCTATGGGCT GTCGTAGCTT CCTAGGCACT TACGAAGAGG ATGGCGAACT TATCCATGAA
GGTCGTAACA ACCTTGGTGT AGTTAGCTTG AACTTGCCAC GTATCGCGCT TCGCGCAAAA
GGCAGCGAAG CGAAGTTCTA TGAACTGCTT GATGATCGTC TACGTCTTGC TCGTAAAGCA
CTAGAAACGC GTATTTCTCG TCTAGAGAAC GTAAAAGCGC GCGTTGCCCC AATTCTATAT
ATGGAAGGTG CATGTGGTGT GCGCTTGAAA GCGGACGATT CGATTGCAGA AATCTTCAAA
AACGGCCGTG CATCAATTTC TCTAGGCTAC ATTGGCGTGC ATGAAACTAT CAACGCGTTG
TTTGGTACTG AAGCGCACGT TTACGATGAT GCCGTATTGC GTGAAAAAGC GGTCGCGATC
ATCAAACATC TAAAAGATGC GGTGAATCAA TGGGCTGACG AAACTGGCTA TGGCTTTAGC
TTGTACGCAA CACCAAGTGA AAACCTATGC AGTCGTTTCT GCCGCATCGA CACCAAAGAG
TTTGGTTTGA TTGAAGGCGT AACAGACAAA GGTTACTACA CCAACAGTTT CCACTTGGAT
GTTGAGAAGA AGGTTAACCC TTACGACAAG ATCGACTTCG AGATGCCTTA CCCAGAAATC
TCAAGCGGTG GCTTCATCTG TTACGGTGAG TTCCCGAACA TGCAACGTAA CGTAGAAGCG
CTAGAAAACG TGTGGGACTA CAGTTACACC CGCGTTCCTT ACTACGGAAC CAACACTCCG
ATTGATGAGT GTTATGAATG TGGTTACACC GGTGAGTTTG AATGTACAAG CAAAGGCTTT
ACTTGCCCAA GTTGTGGCAA CCACGATTCA ACCAAAGTAT CGGTGACACG TCGCGTATGT
GGTTACTTGG GCAGCCCAGA TGCACGTCCG TTTAACTTCG GCAAACAAGA AGAAGTTAAA
CGTCGAGTGA AACACCTATA A
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| Protein sequence | MKPIVIKRDG SRAPFNRDRI QAAVEAAAEN KDKDVAIYAL NVALAVELQL KDHDEVHIHE
IQDLVENELM QGPYKALARS YIEYRHDRDI AREKQSALTR EIEGLIEESN LDLINENANK
DGKVIPTQRD LLAGIVAKHY AKTHILPRDV VQAHEVGDIH YHDLDYAPFF PMFNCMLIDL
KGMLTHGFKM GNAEIDTPKS ISTATAVTAQ IIAQVASHIY GGTTINRIDE VLEPYVITSY
EKHLEIAKEW NIAEPEEFAK ARTEKECYDA FQSLEYEVNT LHTANGQTPF VTFGFGLGTS
WASRLIQQSI LKNRIAGLGK NRKTAVFPKL VFGIKDGLNH KAEDPNYDIK KLALECASKR
MYPDILNYDK VVEVTGSFKT PMGCRSFLGT YEEDGELIHE GRNNLGVVSL NLPRIALRAK
GSEAKFYELL DDRLRLARKA LETRISRLEN VKARVAPILY MEGACGVRLK ADDSIAEIFK
NGRASISLGY IGVHETINAL FGTEAHVYDD AVLREKAVAI IKHLKDAVNQ WADETGYGFS
LYATPSENLC SRFCRIDTKE FGLIEGVTDK GYYTNSFHLD VEKKVNPYDK IDFEMPYPEI
SSGGFICYGE FPNMQRNVEA LENVWDYSYT RVPYYGTNTP IDECYECGYT GEFECTSKGF
TCPSCGNHDS TKVSVTRRVC GYLGSPDARP FNFGKQEEVK RRVKHL
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