Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000093 |
Symbol | |
ID | 8558398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 106092 |
End bp | 106922 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 646407758 |
Product | formate dehydrogenase chain D |
Protein accession | YP_003287246 |
Protein GI | 262395393 |
COG category | [C] Energy production and conversion |
COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.257578 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGATGTA CTACTCAATC TTATTTTGAA CTGTCCGATT TCAATCAAGC ACCACCTCAA CCAAGTGCAT TCAATTACCG AGAATTGATT GATGGCCGCC CAGTGCAACA AATGTCGCTG GCGAGTGAGT CAGCTTTAGC TATCAGCTAC AACGGCATTA GCCAAGCGGT CATGATGGTG ACGCCAGGCC ATCTGGAAGA CTTCGTGAAA GGATTTAGCC TAAGCACAGG CATCGTCCAC GACTTCAAAG AGATCAAAGA CATTGAAATT GGTGGCGATC ACGAATCTTA CTATGCGGAA GTGGAAATCA GCAACCGCGC TTTCTGGGCG TTAAAAACAC AACGCCGAAA TCTTGCTGGC ACAACCGGAT GCGGCATTTG TGGCGTCGAG GCTCTTGAAC AAGCTTTGCC TGATTTGGTG CCACTGACAC CGTCTCTTCC TCCGCGCTCC GATGTATTCG AAGGGCTGCG AGACAAAGTC GCACAGCATC AAGAAGCCGC ACGTGAATCT GGCGCGTTAC ACGCCGCTTT ATTTGCAGAT TTACAAGGCA ACATCAAGTT GTGCCGAGAG GACATCGGCC GCCACAACGC GCTAGATAAG TTGATTGGCG CATTGGCCAA CAATCACATC GAACCTCAAA GTGGCTTCGC AATCATGACA AGCCGTTGCA GCTTAGAGTT GATCCACAAA GCCGTTCGCG CGCGCATCCC CACACTGGTT TGCTTATCTG CACCTACAGC GTTAACCGTC GAATGGGCAA GAAGAAACCA TTTGAACCTA ATTCACTTGC CAAAACACGG CTCGCCGCGT CTATACAGCC CTGCGCCTTA A
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Protein sequence | MRCTTQSYFE LSDFNQAPPQ PSAFNYRELI DGRPVQQMSL ASESALAISY NGISQAVMMV TPGHLEDFVK GFSLSTGIVH DFKEIKDIEI GGDHESYYAE VEISNRAFWA LKTQRRNLAG TTGCGICGVE ALEQALPDLV PLTPSLPPRS DVFEGLRDKV AQHQEAARES GALHAALFAD LQGNIKLCRE DIGRHNALDK LIGALANNHI EPQSGFAIMT SRCSLELIHK AVRARIPTLV CLSAPTALTV EWARRNHLNL IHLPKHGSPR LYSPAP
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