Gene VEA_000089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000089 
Symbol 
ID8558394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp100687 
End bp102027 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content50% 
IMG OID646407754 
Producthexose phosphate uptake regulatory protein UhpC 
Protein accessionYP_003287242 
Protein GI262395389 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID[TIGR00881] phosphoglycerate transporter family protein
[TIGR00712] glycerol-3-phosphate transporter 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGGAT TTTTACGTTC ACCTAAATTT ACTCAACCGA GTCTGAGCAA AGAGCAAATC 
GACCAGCGTT ACCGCCATTG GCGTTTGCAC ATTATGTTGG GGATGTACAT CGGCTACGCA
GGTTTCTACT TTACCCGTAA GACCTTTAAC TACGCCGCAC CAGCTATGAT TACCGATCTT
GGCCTAGACA AAGGCGATTT GGGTCTTATA GGCACGCTTT TCTACATCAC CTACGGCTGC
TCGAAGTTTA TTTCTGGCAC GATTTCGGAT CGCTCTAACC CTCGTTATTT CATGGGGCTA
GGCTTGATTG CGACAGGTCT GGTCAATATC GCGTTCGGCT TTTCTAGCTC ACTCGCGGCT
TTCATCACTC TGTGGATCTT AAACGCGTGG TTCCAAGGCT GGGGCTGGCC TTCATGCTCC
AAGCTGCTAA CCACTTGGTA TTCACGCTCC GAGCGTGGCT TCTTATGGGC GATTTGGAAC
ACCGCACACA ACGTTGGTGG CGCGCTGATC CCTATTTTGG TGGGCTATTT AACGTTGCAC
TACAGCTGGC GTGAAGGCTT TATTCTACCC GGTATCATCG GCGTATTACT CGGTCTATTC
GTTTGTTGGC GATTGCGCGA CAAACCCACA ACAATGGGTT TGCCAAGTGT CGGACAATGG
CGCAACGACG CGCTAGAACT TGCGCAAGAA AATTACGGAC GTGGCCTCAC CTACCGCGAA
ATTCTGAAAT CGTACGTATT TAACAACGAA TACATCTGGC TGCTCGCGTT CAGTTATGTG
TTGGTTTACA TCGTCCGAAC CGCAATCAAT GACTGGGGAA ACCTGTACTT AACAGAGCAG
CATCACTATA GCCTGATTAA CGCCAACGCT GCTCTGTCGA TGTTTGAAAT CGGTGGTTTT
GTTGGTTCAT TGGTTGCGGG TTGGGGCTCA GACAAACTCT TTGGCGGTAA CCGTGGGCCA
ATGAACTTGC TGTTCGCGAT TGGGATTTTC TTATCTGTCT CTGCGCTTTG GCTGATGCCT
CTGACCAACT TTGCATTCCA AGCGGCGGGA TTGTTCTCCA TCGGCTTCTT TGTCTTTGGG
CCACAAATGC TGATCGGTAT GGCGGCAGCG GAGTGCTCTC ACAAAGATTC TGCAGGCGCG
GCAACAGGAT TCGTGGGCTT GTTCGCCTAC ATGGGCGCAG CATTGTCTGG CTATCCACTG
GCGTTAATTC TTGAAGAATA TCATTGGACG GGTTTCTTCA TCACCATTTC AGTTTGTGCA
GCCGTCATTG GCCTTTTATT GCTGCCATTT TTGCAAGCGC AACCATCACG AAAACCACTC
GAACCAAAAC CTCGGTTGTA A
 
Protein sequence
MFGFLRSPKF TQPSLSKEQI DQRYRHWRLH IMLGMYIGYA GFYFTRKTFN YAAPAMITDL 
GLDKGDLGLI GTLFYITYGC SKFISGTISD RSNPRYFMGL GLIATGLVNI AFGFSSSLAA
FITLWILNAW FQGWGWPSCS KLLTTWYSRS ERGFLWAIWN TAHNVGGALI PILVGYLTLH
YSWREGFILP GIIGVLLGLF VCWRLRDKPT TMGLPSVGQW RNDALELAQE NYGRGLTYRE
ILKSYVFNNE YIWLLAFSYV LVYIVRTAIN DWGNLYLTEQ HHYSLINANA ALSMFEIGGF
VGSLVAGWGS DKLFGGNRGP MNLLFAIGIF LSVSALWLMP LTNFAFQAAG LFSIGFFVFG
PQMLIGMAAA ECSHKDSAGA ATGFVGLFAY MGAALSGYPL ALILEEYHWT GFFITISVCA
AVIGLLLLPF LQAQPSRKPL EPKPRL