Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000085 |
Symbol | |
ID | 8558390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 94403 |
End bp | 95728 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 646407750 |
Product | DUF1501 domain-containing protein |
Protein accession | YP_003287238 |
Protein GI | 262395385 |
COG category | [S] Function unknown |
COG ID | [COG4102] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.40571 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATATTT CACGACGACA TTTTATAAAA AGCACTGCAT CGATGGGCGC TTTAGCTTCG CTTGGTCTAC CGGGTTATTC TCTCGCGGCG CCATCCAATG ACTTTCGAGC ATTGATATGT GTTTATTTAG CAGGTGGAAA CGATGCGTTC AACACTGTAC TGCCGTTGTC TGACGCGCAC TATAACCAAT ATGCCAAAGT CAGAGGGGCT CTTTCTGTCA CCAAAGACGA CATACTCCCT ATCAATTTGC GTACCACCGA TAGCTCGGAT AATCTGGTAG AACTTGGCTT ACACCCCAAA CTAAAGGCGC TGTCTTCAAT TTTCGAACAA GGCGATGCCA ATATCGTGCT CAATAGCGGT ATTCTCAACC ATCCCGTTAC AAAACAAGCG ATTGAGCTAG GTGAAGCGTC ACTTCCCGAG CAACTGTTTT CCCACAATTC ACAAACAGAC GCTTGGTTAC TTGGTGGTAT GCAAGAATCT AGCAATTTGG GTTGGGCGGG CAGAATGTTG GACGTATTAA CTTCTGAATC AGAAATAACC CCACTATACA GTGTTCACGG GAACTCGCTT TGGTTACGCG CGATGGAACA CCGCCAAACC GTGCTGAAAA AAGACCGTGC GGTTCAGCTT ACCGCGATTG ATAACCCGCT ATACAAGGGG ATCTATGACC AACTGCTTTC TCATCAAACA GAGAATCCGT TTAGTGGCCA CTTTAATTTG ATGGTTGATG AGTCGATGAT GATGAGCCGT GTGCTAAGCG AGCAACTCAA TCATATTGAT GACGCGCCGC TGTTCACCTC ATCAACACTC GGCAAGCAGA TGCAAACCGT CTATAAATTG ATCGCAAGCC AAGATGTGTT AAAGCAACAA CGACAAGTCT TCTTCGTTAA ACACTCTGGC TACGACCTAC ACGATTCTCA ATTAGTTCGA CACCCCGTAC TACTCGAAGA TCTAGCAACT AACCTCTTAG CAATGTATCG TGCGATTGCG CGGTTGGGGC TAAACAAGCA AGTCACCTCT TTTACAATGT CTGACTTTGG TCGACGGATG ACAAGCAACG GTAACGGCAC CGATCACGGT TGGGGTGGTC ATCAACTATT GATTGGAGGC GCGGTGAATG GTCAGCGACC TATCGGCACA TGGCCTGAAC TAGTATTGGG TGGAAACGAT GACTATTCTC AAGGTCGACT CATACCCCAA ATTGCAGCAG ATCAGGTGGG CTCAACTCTC GCGCAATGGA TGGGCGTGAG TGATAACGCG GCATTGGAAT ACGTGTTCCC GAATATCCGC AACTTCGCTA ATTCAAACCT TGGCTTTATG GCTTAA
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Protein sequence | MDISRRHFIK STASMGALAS LGLPGYSLAA PSNDFRALIC VYLAGGNDAF NTVLPLSDAH YNQYAKVRGA LSVTKDDILP INLRTTDSSD NLVELGLHPK LKALSSIFEQ GDANIVLNSG ILNHPVTKQA IELGEASLPE QLFSHNSQTD AWLLGGMQES SNLGWAGRML DVLTSESEIT PLYSVHGNSL WLRAMEHRQT VLKKDRAVQL TAIDNPLYKG IYDQLLSHQT ENPFSGHFNL MVDESMMMSR VLSEQLNHID DAPLFTSSTL GKQMQTVYKL IASQDVLKQQ RQVFFVKHSG YDLHDSQLVR HPVLLEDLAT NLLAMYRAIA RLGLNKQVTS FTMSDFGRRM TSNGNGTDHG WGGHQLLIGG AVNGQRPIGT WPELVLGGND DYSQGRLIPQ IAADQVGSTL AQWMGVSDNA ALEYVFPNIR NFANSNLGFM A
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