Gene VEA_000085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000085 
Symbol 
ID8558390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp94403 
End bp95728 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content47% 
IMG OID646407750 
ProductDUF1501 domain-containing protein 
Protein accessionYP_003287238 
Protein GI262395385 
COG category[S] Function unknown 
COG ID[COG4102] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.40571 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATTT CACGACGACA TTTTATAAAA AGCACTGCAT CGATGGGCGC TTTAGCTTCG 
CTTGGTCTAC CGGGTTATTC TCTCGCGGCG CCATCCAATG ACTTTCGAGC ATTGATATGT
GTTTATTTAG CAGGTGGAAA CGATGCGTTC AACACTGTAC TGCCGTTGTC TGACGCGCAC
TATAACCAAT ATGCCAAAGT CAGAGGGGCT CTTTCTGTCA CCAAAGACGA CATACTCCCT
ATCAATTTGC GTACCACCGA TAGCTCGGAT AATCTGGTAG AACTTGGCTT ACACCCCAAA
CTAAAGGCGC TGTCTTCAAT TTTCGAACAA GGCGATGCCA ATATCGTGCT CAATAGCGGT
ATTCTCAACC ATCCCGTTAC AAAACAAGCG ATTGAGCTAG GTGAAGCGTC ACTTCCCGAG
CAACTGTTTT CCCACAATTC ACAAACAGAC GCTTGGTTAC TTGGTGGTAT GCAAGAATCT
AGCAATTTGG GTTGGGCGGG CAGAATGTTG GACGTATTAA CTTCTGAATC AGAAATAACC
CCACTATACA GTGTTCACGG GAACTCGCTT TGGTTACGCG CGATGGAACA CCGCCAAACC
GTGCTGAAAA AAGACCGTGC GGTTCAGCTT ACCGCGATTG ATAACCCGCT ATACAAGGGG
ATCTATGACC AACTGCTTTC TCATCAAACA GAGAATCCGT TTAGTGGCCA CTTTAATTTG
ATGGTTGATG AGTCGATGAT GATGAGCCGT GTGCTAAGCG AGCAACTCAA TCATATTGAT
GACGCGCCGC TGTTCACCTC ATCAACACTC GGCAAGCAGA TGCAAACCGT CTATAAATTG
ATCGCAAGCC AAGATGTGTT AAAGCAACAA CGACAAGTCT TCTTCGTTAA ACACTCTGGC
TACGACCTAC ACGATTCTCA ATTAGTTCGA CACCCCGTAC TACTCGAAGA TCTAGCAACT
AACCTCTTAG CAATGTATCG TGCGATTGCG CGGTTGGGGC TAAACAAGCA AGTCACCTCT
TTTACAATGT CTGACTTTGG TCGACGGATG ACAAGCAACG GTAACGGCAC CGATCACGGT
TGGGGTGGTC ATCAACTATT GATTGGAGGC GCGGTGAATG GTCAGCGACC TATCGGCACA
TGGCCTGAAC TAGTATTGGG TGGAAACGAT GACTATTCTC AAGGTCGACT CATACCCCAA
ATTGCAGCAG ATCAGGTGGG CTCAACTCTC GCGCAATGGA TGGGCGTGAG TGATAACGCG
GCATTGGAAT ACGTGTTCCC GAATATCCGC AACTTCGCTA ATTCAAACCT TGGCTTTATG
GCTTAA
 
Protein sequence
MDISRRHFIK STASMGALAS LGLPGYSLAA PSNDFRALIC VYLAGGNDAF NTVLPLSDAH 
YNQYAKVRGA LSVTKDDILP INLRTTDSSD NLVELGLHPK LKALSSIFEQ GDANIVLNSG
ILNHPVTKQA IELGEASLPE QLFSHNSQTD AWLLGGMQES SNLGWAGRML DVLTSESEIT
PLYSVHGNSL WLRAMEHRQT VLKKDRAVQL TAIDNPLYKG IYDQLLSHQT ENPFSGHFNL
MVDESMMMSR VLSEQLNHID DAPLFTSSTL GKQMQTVYKL IASQDVLKQQ RQVFFVKHSG
YDLHDSQLVR HPVLLEDLAT NLLAMYRAIA RLGLNKQVTS FTMSDFGRRM TSNGNGTDHG
WGGHQLLIGG AVNGQRPIGT WPELVLGGND DYSQGRLIPQ IAADQVGSTL AQWMGVSDNA
ALEYVFPNIR NFANSNLGFM A