Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000042 |
Symbol | |
ID | 8558341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | + |
Start bp | 46004 |
End bp | 46537 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 646407701 |
Product | lipoprotein Blc |
Protein accession | YP_003287195 |
Protein GI | 262395342 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3040] Bacterial lipocalin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCGC TAAAAACATT ATTACTTTTA TCACTTGTTA CTTTATTTGG CTGTACCTCT AAACCTGATG GGGTACAGCC AGTTAACAAT TTTGATTTAG AGTCTTATCT AGGCAAGTGG TACGAAATCG CACGGCTCGA TCATTCGTTT GAGCGTGGTC TATCCAACGT TACGGCCGAG TATCGGCTTC GTGAGGATGG TGGGGTTAAG GTGACAAACC GCGGGTATTC AGAAGAAGAT CAGCAGTGGT CAGAAGCTGA AGGTAAAGCT TATTTTGTTG AAGACGAAAC GGTTGGGCAC TTAAAAGTCT CCTTTTTTGG GCCAATCTAT TCTTCTTACA TTGTGTTTGA GCTAGTTGAA AACTATGACT ATGCGTTTGT CTCAGGTTAC AACCACGACT ACTTGTGGCT ATTGTCTAGA ACCCCCAACG TTGATGAGAA AATCCTGGAG CGTTTTAAGC AGGTTGCTAA AGAGAAAGGT TTCGCGTTAG ATGAGCTAAT TCTCGTTGAT CAAGAGAGTG GACGACAGTT TTAA
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Protein sequence | MKSLKTLLLL SLVTLFGCTS KPDGVQPVNN FDLESYLGKW YEIARLDHSF ERGLSNVTAE YRLREDGGVK VTNRGYSEED QQWSEAEGKA YFVEDETVGH LKVSFFGPIY SSYIVFELVE NYDYAFVSGY NHDYLWLLSR TPNVDEKILE RFKQVAKEKG FALDELILVD QESGRQF
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