Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000037 |
Symbol | |
ID | 8558336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | + |
Start bp | 42084 |
End bp | 43181 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 646407696 |
Product | nopaline dehydrogenase putative |
Protein accession | YP_003287190 |
Protein GI | 262395337 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCGG AATACATAGT TGTCGGTGGC GGTGTCGTGG GTTGCGCTTT GGCCTACGGG CTGCTGAAAG CCGGCCATCA AGTCACCGTA TTAGACGGTG GAGACAGTGC GCATCGGGCA TCACGCGGAA ACTTTGGCTT AGTGTGGTTA TCAAGCAAAG GGTTAGACGC GCCACATTAC GCAGCGTGGA CACGTCGTTC AGTGAATTTG TGGCAAGGAT TAGCGCACGA GCTGGAAAGT GCAACGGGTG AAAAGTTAAA CCTGGTTCAG CAAGGTGGAT ACGATTTCCA CTTCTGTGAA AAAGAACTCA TGGCCAAGGC GCAGCAATAC GAGCATTTAC GCGAAGCCCT GGGTACTGAT CATCCCTATG AAGTCTGGGA CAGAGCCCGC TTGCTCAAAG AAGAACCCGA TATCGGCCCA GATGTGGTAG GGGCGATTTA TGGCCCGGAA GATGGTCATG TGAATCCGCT GCAACTACTT AAAGCGTATA CCAAAGCCAT TCGTAATCTT GGCGCGAACC TTATTACGGG TGTCCATGTC TCGGATATTG AAAAGGATGA CACAGGGCGC TTTCAAGTAA CACTTGAGGA CGGTACGCAG TACCAAAGTG ATAAAGTGAT CCTGTCTGCG GGTTTAGGTG CGGCCAAACT CGGACCTAAG TTGGGCTTTG TTGCCCCAAT TTCGCCTCAA AAGGGGCAAG TGCTGATCAC GGAAAAATTG CCGAAAATCA TCAAGCGTCC TTCTGGCATT ATTCGACAGG TTGACGAAGG CGGCATCCAG ATTGGTGACT CGAAAGAGAA CGCTGGGTTT GATGATAGTG ACACGCTTGA AATGACAGCC GCTATTGCGG AACGAGCCAT CGCCGTGTAT CCGTTTTTGG CACAAACAAG ATTGGTCCGC AGTTGGGGCG CGATTCGAAT TGTCTCTCCT GATGGCCTGC CGATCTACCA GCAATCAACA ACGCATTCTG GCGCTTACCT GATTAGCTGC CACAGCGGAA TTACCCTTGC AGCGGCGCAC TCCTACTTAC TTCCACATTG GCTGGAAGAT TCTGCCGATG CACCAAATTT GGAGGTGTTC AGTGAAGAAC GATTCTAA
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Protein sequence | MKPEYIVVGG GVVGCALAYG LLKAGHQVTV LDGGDSAHRA SRGNFGLVWL SSKGLDAPHY AAWTRRSVNL WQGLAHELES ATGEKLNLVQ QGGYDFHFCE KELMAKAQQY EHLREALGTD HPYEVWDRAR LLKEEPDIGP DVVGAIYGPE DGHVNPLQLL KAYTKAIRNL GANLITGVHV SDIEKDDTGR FQVTLEDGTQ YQSDKVILSA GLGAAKLGPK LGFVAPISPQ KGQVLITEKL PKIIKRPSGI IRQVDEGGIQ IGDSKENAGF DDSDTLEMTA AIAERAIAVY PFLAQTRLVR SWGAIRIVSP DGLPIYQQST THSGAYLISC HSGITLAAAH SYLLPHWLED SADAPNLEVF SEERF
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