Gene VEA_000029 details

Gene Information

• Locus tag: VEA_000029
• ID: 8558327
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013457
• Strand: +
• Start bp: 30584
• End bp: 32419
• Gene Length: 1836 bp
• Protein Length: 611 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 646407687
• Product: hypothetical protein
• Protein accession: YP_003287181
• Protein GI: 262395328
• COG category: [S] Function unknown
• COG ID: [COG3501] Uncharacterized protein conserved in bacteria
• TIGRFAM ID: [TIGR01646] Rhs element Vgr protein; [TIGR03361] type VI secretion system Vgr family protein

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAGAG CAACTCAAGA TAACAATTTC ATCCGAATTT CCTCTCCATT CGGAAAAGAT 
GCCATCATAC TAAACTCATT TGAGTATAAA GAAGAGATCT CAGAACTTTT TTCATTGCGT 
GCTAAAGCTT ACTTTAATGA TCAACGAAGT GAGTTAAACG AAATAATTGG TAAAGAAGTA 
ACAATTACCC TTGAAAATAG TGAGGATGTT TCTTCAAAAC CTCGTTATAT ACATGGTTAT 
GTATCTGCTG CAAGATTAGA AGGGCAACGA GTTTCTAATA CTCATAATGG TGAGAATTAT 
AAAAATATAG AGTTATTAAT AGAGCCTAAA TTACGTTTCG CCGATTATAG AAAAAATTGC 
AGAATATTTC AGCATAAAGA TATAAAAGAA ATTATCTCCG AAGTACTCTC GGAGCATAGT 
GTCGCCTTTA GTTTTGAGTT AACTAAGTCG TACCCTAAAT ACACATACAA AGTGCAATAT 
GAAGAGTCAG ACCTTGAATT TGTCCGACGC TTATTGTCAG AAGAAGGGCT ATCGTTCTGT 
TTCACACACA CTAAGTCTGT CCACACGCTT AAGATTTTTG ATGACATCAG TTTCTATAAG 
CCGGGTACAG AGTTTTTAGT CGATTTTGAT ACAGGTACGG CTAAGTCTAG CCATATTTCT 
TCTTGGCATG AAACCCAAGT TTTGACGACT AAAGCAAGCC AAAAGTCTGG CTATAACATG 
CTTAAGCCTT CGTCTAATCC TAAAAATACT GCCAAGGGTG AAAGTGATTT TTTTACCGTG 
CCTGAAAGCG AGTATTTTGA ATACATGGGT GAAACGGAAA GTGATGATCA ATACGCACTT 
AGAAACACGC ACGCTATAGA AGCACTACAG CAAAACGCAT ATCTGTGTCG TGGCGAGGCA 
ACGTGTCGAA CGTTCAGTGT GGGAAAGTGC TTTAAGTTTA AAAAGCATGA AGATAAGTCT 
CGAGTCGGCA AAGAATACGT ACTGTCCGCC GTTTTTTTAT CTGCGGCTGT TTATAATCAG 
ACTGGTCAAG GTGGCACTGC TGCGCAAGGT GTTAAAGTAT CATTTAGTTG TGTTGACTCA 
AAAACAATCC TTCGCCCTTC TGTGAACTAT CCGAAACCTC AGATGAAAGG TTTGCAAACC 
GCAGTGGTAA CGGGAAACAA AGATGGCGAA ATTTACATAG ACAAACACGG TCGTATTAAA 
GTTCAGTTTC ACTGGGATCG TGTTGGTAAA TACGATGTAA ACAGCTCATG TTGGATTCGT 
GTTGCGCAAA ATATCGCGGG TAACGGATGG GGCTCGGTGT TTCATCCTAG AGTAGGACAA 
GAGGTCATCG TCGAGTTTGT CAATGGCGAT CCTGACCAGC CAATTGTTAC GGGGTCACTG 
TACAATGGTA GTCAACTCCC TCCCTACACG TTACCAGAGC AAAGCTCTCA AAGTGGTTAT 
AAATCGCGTT CTGTACAAAA AGGCACATCT AATTTTAATG AGTTGCGCTT TGATGACAAA 
CCCGGTGAAG AACACATCTA TCTTCATGCC GAAAAACTTT TCCAAATGCT AGTTGAAGAC 
TGTGTTGATA TTGCCGTTGA AAACAGTAAA ACCGAAAAAG TGACGAATGA TGTCAATCAA 
GAGATTGGCA AGAATGCGAC CTTGAAAGTA GGTAAAAACT TTTCTAATGA AACGGGTGAA 
GTGTTGTCTT TTAATGCAGG AAAGAGTATC GAGATCAAAG TCGGTGGCGC TTCGATTCAG 
ATGTCTAGTT CCGGAGAAAT CAACATCAAA GGCAATAAAA TATCTATTAA CGGCTCTGCT 
ATCGCTCTTA AAGCTGGGCA AATTTCATTG AACTAA 

 

Protein sequence

MKRATQDNNF IRISSPFGKD AIILNSFEYK EEISELFSLR AKAYFNDQRS ELNEIIGKEV 
TITLENSEDV SSKPRYIHGY VSAARLEGQR VSNTHNGENY KNIELLIEPK LRFADYRKNC 
RIFQHKDIKE IISEVLSEHS VAFSFELTKS YPKYTYKVQY EESDLEFVRR LLSEEGLSFC 
FTHTKSVHTL KIFDDISFYK PGTEFLVDFD TGTAKSSHIS SWHETQVLTT KASQKSGYNM 
LKPSSNPKNT AKGESDFFTV PESEYFEYMG ETESDDQYAL RNTHAIEALQ QNAYLCRGEA 
TCRTFSVGKC FKFKKHEDKS RVGKEYVLSA VFLSAAVYNQ TGQGGTAAQG VKVSFSCVDS 
KTILRPSVNY PKPQMKGLQT AVVTGNKDGE IYIDKHGRIK VQFHWDRVGK YDVNSSCWIR 
VAQNIAGNGW GSVFHPRVGQ EVIVEFVNGD PDQPIVTGSL YNGSQLPPYT LPEQSSQSGY 
KSRSVQKGTS NFNELRFDDK PGEEHIYLHA EKLFQMLVED CVDIAVENSK TEKVTNDVNQ 
EIGKNATLKV GKNFSNETGE VLSFNAGKSI EIKVGGASIQ MSSSGEINIK GNKISINGSA 
IALKAGQISL N