| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000027 |
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| Symbol | |
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| ID | 8558325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 27280 |
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| End bp | 29847 |
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| Gene Length | 2568 bp |
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| Protein Length | 855 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 646407685 |
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| Product | ClpB protein |
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| Protein accession | YP_003287179 |
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| Protein GI | 262395326 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTCAC TCTCACTTTC AGCGTTGGTC GAAAGATTGT CTCCTCAGGC TAAGGAAACA
CTTGAACAAG CAGCTGCGAT GGCAAGCTCT CGAACCCATC ACAGTATTGA AATGTCTCAC
TGGTTAATGA CGATTATTCA ACATCCTGCC GATATTTACT CGGAAGTTTT CGACGAATTT
GATGTCGATA AAATCAAGGT TGAAACTGAT CTTCAAAAGA CACTTGAAAA ATACAAAACG
GGATGTCAAT CGGTCCCAGG TCTTTCAGCT CACACAGTGA CTGTGATGCA AAATGCTTTG
CTATCGGCAA CGATTGAGTT CAATCAGGAG CAGTTGGATT GCATTCATCT TTTATTTGCC
TACTTGTCTG ATGATACGTT AGTCAACATG GCTGGTTCGA TTAGCCCTGA GTTAAACAAG
ATAGAACCAT CTCGGTTATT GAACTTTAAA GAAAGTAATA CGCGTCAATC AGGATCGAAT
GACCTAGGGA AATCAAACGC GAATTCTGCG CTGAATCAAT TTACAACAGA TCTTACTGAG
CAGGCTAGGG AAGGTAAGAT AGATCCAGTT ATTGGTAGAG ACAATGAAAT CCGTTTAATG
ATCGACATCT TATTAAGACG TCGACAAAAC AACCCGATTC TAACTGGTGA AGCTGGCGTT
GGAAAAACAG CCGTTGTTGA AGGCTTGGCG CAAAAGATTA TCGATGGCGA TGTACCTCCT
GCTCTACAAA ATGTAGCGAT TAAGTCTTTG GATCTGGCGT TATTGCAAGC TGGTGCTGGC
ATGAAAGGTG AGTTTGAAAA CAGACTTAAA AACCTTGTGA AAGAAGTTAA CGACGCACCA
CAACCCATTA TTTTGTTTAT CGATGAAGCA CATGGTCTGA TTGGTGGTGG GGGACAAGCA
GGACAAGGTG ATGCAGCGAA TATTCTAAAG CCAGCGTTAG CGAGAGGTGA ACTCAGAACG
ATCGCAGCAA CAACTTGGGC AGAATATAAA AAGTATTTTG AAAAAGACGC GGCTCTTACC
AGACGCTTTC AAGTAGTGAA GGTCGACGAG CCAGCGCCGG ATCTAGCGAT CGAGATGTTA
CGTGGTTTAC TTGACGTAAT GGCACAACAC CATGACGTCC ACATCACTAG CCAGGCTCTC
AATGCTGCCG TTCAACTCTC AGCTCGATAC ATTAATGGCC GACAACTGCC AGATAAGGCT
GTGTCTGTTT TAGACACAGC CTGCTCGCGA GTCGCGTTAA GTCAATCGTC TACACCGGGA
GGTCTAGATG CGAAAAGGAA TAAACTAAAA GCCAAGCAAG CTGAATATGA GCACCTAAGC
CAAGAAAGTC AGCTAGGTGC ACCTCTTGAT ATGCAGTTGC AAGATGTCAG AAAAGAGATT
GATGTTCTAT CTAGTGAAAT AGTTGAACTA GAGACGCTGT GGGAGAAAGA AAAAGAGTGG
GTAAGTGAAG CTAAGTCACT TAGAGCTCAA ATAATCAAGG AGGGTTCTGA GACTGCTAGG
GACAAGTTAC AGGAGCTCGA AAGTAGCCTC TCCGCTAACT CGCAACCATT AGTATTTTCG
CATGTCAATG AAGCGCTTAT TGCAGAAGTA ATTTCAGATT GGACCGGGAT ACCACTGGGC
AAACTTCAGG ATGATGAAAT CCAAGCTGTA CTGAGTTTGA AAGAGAGTTT GTGTAAACGA
GTTGTCGGAC AGGAGCACGC TTTGGAAGTC ATGTCTGAAG TGATAAAAAC TGCCAGTGCA
CAGCTCACTG ATGAGACACG ACCAAATGGT GTATTTCTTC TCACGGGACC AAGTGGAGTG
GGTAAAACTG AATCTGCTTT AGCTATTGCA GAGAAAGTGT ACGGCAGTGA AGAGAATGTC
ACAACTATCA ATATGTCCGA GTTTAAAGAA GAGCACAAAG TTTCCTTATT ATTAGGCTCG
CCTCCAGGTT ATGTTGGGTA TGGCGAAGGT GGTGTACTTA CTGAAGCCGT CAGACGCAAA
CCTTATAGTG TGATTCTTTT GGATGAAATG GAAAAAGCGC ACCCTGGAGT TCAAGATATT
TTTTATCAGG TATTCGATAA AGGCTCAATT AAAGATGGTG AAGGTCGAGA TATAGATTTT
AAAAACACTA TTATTATTAT GACCGCGAAT ACAGGGACCG AAACGACGAT GTCTTTGTAT
TCTGATCCTG ATTTATCTCC AGAACCTTCA GCACTAAAAG ATGCTTTGCG TGACGATTTG
TTGGTTGACT TTAAACCTGC ATTTTTAGGG CGTGTTAATG TATTACCTTA TTTGCCTCTA
TCAAGAGAAG TATTGATAGA AATAACAAAA TTAAAATTAG CCAAAGTTAC GAATCGCATT
CGTAAAAATT ACGGCGCTGA CCTATTTTTT GATGAAGAAC TAATTAATGA TATTGTAGAC
AATAGTAATG AGTCGGGGAG CGGTGCACGT GTGGTACAGA CAACCATAGA AAACACATTA
CTTCCTAAGA TTTCTCATGA AATATTGCAT GCAATTCTTA ATGATAAGAC GTTTGATGAA
ATTATTGTTA AAGGTACAAC TAGTGGACTT GATGTCTCAA TAGTTTAA
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| Protein sequence | MASLSLSALV ERLSPQAKET LEQAAAMASS RTHHSIEMSH WLMTIIQHPA DIYSEVFDEF
DVDKIKVETD LQKTLEKYKT GCQSVPGLSA HTVTVMQNAL LSATIEFNQE QLDCIHLLFA
YLSDDTLVNM AGSISPELNK IEPSRLLNFK ESNTRQSGSN DLGKSNANSA LNQFTTDLTE
QAREGKIDPV IGRDNEIRLM IDILLRRRQN NPILTGEAGV GKTAVVEGLA QKIIDGDVPP
ALQNVAIKSL DLALLQAGAG MKGEFENRLK NLVKEVNDAP QPIILFIDEA HGLIGGGGQA
GQGDAANILK PALARGELRT IAATTWAEYK KYFEKDAALT RRFQVVKVDE PAPDLAIEML
RGLLDVMAQH HDVHITSQAL NAAVQLSARY INGRQLPDKA VSVLDTACSR VALSQSSTPG
GLDAKRNKLK AKQAEYEHLS QESQLGAPLD MQLQDVRKEI DVLSSEIVEL ETLWEKEKEW
VSEAKSLRAQ IIKEGSETAR DKLQELESSL SANSQPLVFS HVNEALIAEV ISDWTGIPLG
KLQDDEIQAV LSLKESLCKR VVGQEHALEV MSEVIKTASA QLTDETRPNG VFLLTGPSGV
GKTESALAIA EKVYGSEENV TTINMSEFKE EHKVSLLLGS PPGYVGYGEG GVLTEAVRRK
PYSVILLDEM EKAHPGVQDI FYQVFDKGSI KDGEGRDIDF KNTIIIMTAN TGTETTMSLY
SDPDLSPEPS ALKDALRDDL LVDFKPAFLG RVNVLPYLPL SREVLIEITK LKLAKVTNRI
RKNYGADLFF DEELINDIVD NSNESGSGAR VVQTTIENTL LPKISHEILH AILNDKTFDE
IIVKGTTSGL DVSIV
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