| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000021 |
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| Symbol | |
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| ID | 8558319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 20153 |
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| End bp | 21646 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646407679 |
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| Product | uncharacterized protein ImpC |
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| Protein accession | YP_003287173 |
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| Protein GI | 262395320 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3517] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03355] type VI secretion protein, EvpB/VC_A0108 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.147425 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACTG AAGCTGAAAA GCAGTTAGAT CCAACTGTTA ATGAACAAAC AACTTCATTT
TTAGATCAAG CTATTGGTGC AACTAAGCAG ACAGAAGCCT CTCGTGCTGA AGAGCTAATT
AAAACGCTCA CTGAAGAAGC GATGAAAGGG ACGGTTACTT GGAACAAAAA CCTAACGGTA
ACTTTTCGTG AAGCGATTAA TTTACTTGAT AAACAGATTT CTGATCAGTT GTCTGAAGTA
ATGCATCATC CTGAATTACA GAAGCTTGAA GGTTCTTGGC GTGGTTTAAA TTATCTAGTG
ATGAACTCAG AGACGAGCTC TACTCTGAAA ATTCGCATGA TGAGTATGAC TAAGAAAGAG
TTACATAAAG ACTTGAGTAA AGCGGTTGAA TTTGACCAAA GCCAGATCTT TAAGAAAGTT
TACGAGTCTG AGTTTGGCAG TGCAGGTGGT GAACCTTATG GTGCATTAAT TGGTGACTAT
GAGTTTACCA ACCACCCAGA GGATATTGAG TCGCTGCGCC TAATGTCAAA TGTAGCCGCT
TCAGGCTTCT CCCCATTCTT GTCCGCGGCC TCACCAGCAC TATTTGGCTT TGATGAGTGG
ACTGAACTGT CAAAACCACG CGATCTAGAC AAGGTCTTTG AGTCGCTAGA ATACGCTCAA
TGGCGTTCGT TCCGTGAGAG TGCTGATTCA CGTTTTGTTA GCCTGACTAT GCCGAAAGTT
CTGGCTCGTT TGCCATACGG ACAAGCCACT GCTCCAGTTG AGGAATTTGG ATTTGAAGAG
TTCGAAGTAG ATCCAGTGTC AGGTATTGCT GTCAATGCTG AGCATAATGA CTACTGTTGG
ATGAACTCTT CGTATGTTCT TGGTGTTAAG TTAACAGACG CCTTCTCAAA ATATGGATTC
TGTACAGCTA TCCGTGGTGC AGAAGGTGGT GGTCGAGTGG ATAATTTGCC AACACATTTC
TTCATGAGTG ATGATGGCGA TCCTGATATG AAGTGTCCAA CAGAGATTGG TATTACCGAC
CGACGTGAGG CAGAGCTGGG TAAACTTGGT TTCTTACCGC TTTGTCACTA CAAAAACACC
AACTATGCGG TGTTCTTTGG TGCGCAAACC TGTCAAAAAC CGGCGAACCA CGAATCTCCA
GAAGCAACGG CTAATGCGGC GATTTCAGCA CGTCTACCTT ACATGATGGC GACATCTCGT
TTTGCGCATT ATTTGAAGGT AATGGCTCGA GATAAAATCG GTAGCTTTAT GGAAGCAGAA
GACGTTGAGT CTTGGTTGAA CCGCTGGATT CTAGGCTATG TAAATGCTTC AGAGGGTGGT
GGTCAAGAGA TCCGAGCGAA ATACCCTCTA GCAGATGCTC GTGTCCAGGT TAAGGAAATC
CCTGGCGCAC CAGGTTCTTA CAATGCTGTA GCATGGCTTA AGCCTTGGCT GCAAATGGAA
GAATTGACGA CATCTTTGCG ACTTGTTGCA AAGATCCCTC AGTCGGGTGG ATAA
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| Protein sequence | MTTEAEKQLD PTVNEQTTSF LDQAIGATKQ TEASRAEELI KTLTEEAMKG TVTWNKNLTV
TFREAINLLD KQISDQLSEV MHHPELQKLE GSWRGLNYLV MNSETSSTLK IRMMSMTKKE
LHKDLSKAVE FDQSQIFKKV YESEFGSAGG EPYGALIGDY EFTNHPEDIE SLRLMSNVAA
SGFSPFLSAA SPALFGFDEW TELSKPRDLD KVFESLEYAQ WRSFRESADS RFVSLTMPKV
LARLPYGQAT APVEEFGFEE FEVDPVSGIA VNAEHNDYCW MNSSYVLGVK LTDAFSKYGF
CTAIRGAEGG GRVDNLPTHF FMSDDGDPDM KCPTEIGITD RREAELGKLG FLPLCHYKNT
NYAVFFGAQT CQKPANHESP EATANAAISA RLPYMMATSR FAHYLKVMAR DKIGSFMEAE
DVESWLNRWI LGYVNASEGG GQEIRAKYPL ADARVQVKEI PGAPGSYNAV AWLKPWLQME
ELTTSLRLVA KIPQSGG
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