| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000007 |
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| Symbol | |
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| ID | 8558305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 3968 |
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| End bp | 5161 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 646407665 |
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| Product | serine phosphatase RsbU regulator of sigma subunit |
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| Protein accession | YP_003287159 |
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| Protein GI | 262395306 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.441967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCCA TTCTTTTGGT CGATGACAGT AAAACAGTAC TACTTTATAT CAGCAGTGCA
TTAGAAAAGC AGGGATATGA AGTTATTGCT GTTGAAGACG GACAATCCGC ACTTGAAGTG
CTGACTTATC GCAAAGATAT TCAGTTTGTA CTTAGTGACT TAATGATGCC TGGCATTAAT
GGTATTGAGC TGTGTCGGCA ATTAAAATCG CAAGTTAGCG AACGTTACAT TTTCTTTGTT
TTATTGTCCT CTAGAAACGA CCAAAGCTCG ATCGTGAAAG GCATCGATGC CGGCGCAGAT
GACTTTGTGG ATAAGAAGAC GTCTGTCGAA GAACTTCAAG CGAGAATTCG AGCAGGTTTT
CGCACTCTGC AGCTGCACAA CAAACTCGTT GAGAGAAATA AAGAGCTAGA TGCGGCCTAT
CAAACAATCC ACCAAGACCT ACAGTCTGCT AGTCATCTGA TGGAGCAACT ACTCCCAGCG
GAGTCGTCTA TCCAGAACAT GCAATTTAGT TACGCCTACA AACCGTGCTC CCAGATTGGT
GGTGACATGT TGGGGTATTT TGAGCTTGAT GAACAACATG TCGCATTTTA TGTTTTCGAT
GTTTCAGGTC ATGGTGTTTC GTCTGCTTTG ATGGCTTTTT CTATCCAACA GACGTTATCT
CAAAATCTGG GACCTGATTC GATAACCATG GAGCTAAGAG ATGGCGACTA CTGTATCAGT
GAACCAGCAG CCGTTATTGA TCGGCTAAAC CGACGGTATC AGCAAACTAG GAACAGTCAG
CTTTATTTCA CCATGGTTTA TGCCATTCTT AATACAGAAT CAGGACAACT TCGCTATTGT
ACTGCTGGTC ATCCTAAGTT CCTTGTTTGG CGAGCGAGCA CCGAAACTAC AGAGCTGGCG
GGTGAAGACA ACTTTATGAT TGGCGCTTTG CAGCCGATGG AGTACGTTGG TAATCAAATT
ATTCTGAGTG AGGGGGATGT AGTATGGCTT TATTCGGATG GTTTGATAGA AGCAAGGAGA
GGTGAGGAGA TGTTTTCAGT ACAAAGGTTG GCATCAAGTA TAAAAGCTGT TTGTTCTTCG
CAATTAGAAG TAGAAGTGCA GGCTAGATGT GTCTTTGAAC AAGTACAATC TTGGCAGAAC
AAAGATGAGT TTGATGATGA TGCGAGTCTT TTACAAGTAA GGTGGCGTGG CTGA
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| Protein sequence | MKSILLVDDS KTVLLYISSA LEKQGYEVIA VEDGQSALEV LTYRKDIQFV LSDLMMPGIN
GIELCRQLKS QVSERYIFFV LLSSRNDQSS IVKGIDAGAD DFVDKKTSVE ELQARIRAGF
RTLQLHNKLV ERNKELDAAY QTIHQDLQSA SHLMEQLLPA ESSIQNMQFS YAYKPCSQIG
GDMLGYFELD EQHVAFYVFD VSGHGVSSAL MAFSIQQTLS QNLGPDSITM ELRDGDYCIS
EPAAVIDRLN RRYQQTRNSQ LYFTMVYAIL NTESGQLRYC TAGHPKFLVW RASTETTELA
GEDNFMIGAL QPMEYVGNQI ILSEGDVVWL YSDGLIEARR GEEMFSVQRL ASSIKAVCSS
QLEVEVQARC VFEQVQSWQN KDEFDDDASL LQVRWRG
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