| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004509 |
|---|
| Symbol | |
|---|
| ID | 8558277 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 3233016 |
|---|
| End bp | 3233606 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 646407638 |
|---|
| Product | ubiquinol-cytochrome C reductase iron-sulfur subunit |
|---|
| Protein accession | YP_003287132 |
|---|
| Protein GI | 262395278 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0723] Rieske Fe-S protein |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000196187 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACG CGCCTTTAAA TAACGGTCGC AGGCGTTTTC TAACCGCTAC AACGGCAGTT
GTTGGTGGGT TAGGGGCAGT CGCCGTCGCC GTGCCTTTTA TCAAATCATG GAATCCGAGT
GCTAAAGCCA AAGCGGCAGG TGCACCGGTG GAAGTGGATA TAAGTAAAAT TGAACCAGGT
CAGCTGGTTC GTGTCGAGTG GCAGGGGAAA CCTGTATGGA TTGTTCGCCG CACTCAAAGC
GTTCTAGATA ACTTAAAAAC GATCGGCGAT AAGCTTCGTG ATCCGCAATC TGAAATGGAA
CAGCAGCCTG AGTACGCTCA GAATGAGTTT CGTTCGATTA AGGAAGAGTT TTTTGTCGCT
GTTGGTTTCT GTACTCACCT AGGTTGTTCA CCAACCTATC TACCAGACTC TTTCTCAGAG
CAGGTCCAGG GCGTAAGATC TGGCTTCTTC TGTCCTTGTC ATGGTTCTAA GTTCGATATG
GCTGGTCGAG TGTTCCAAGG GGTACCTGCT CCATTGAACC TTGTCGTTCC TAAGCACATG
TATTTGAGCG ACACCAAGCT CATTGTGGGT GTTGATGAGG GGGATGCATA A
|
|---|
| Protein sequence | MSNAPLNNGR RRFLTATTAV VGGLGAVAVA VPFIKSWNPS AKAKAAGAPV EVDISKIEPG
QLVRVEWQGK PVWIVRRTQS VLDNLKTIGD KLRDPQSEME QQPEYAQNEF RSIKEEFFVA
VGFCTHLGCS PTYLPDSFSE QVQGVRSGFF CPCHGSKFDM AGRVFQGVPA PLNLVVPKHM
YLSDTKLIVG VDEGDA
|
|---|
| |