| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004495 |
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| Symbol | |
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| ID | 8558263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 3219900 |
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| End bp | 3221381 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646407624 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
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| Protein accession | YP_003287118 |
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| Protein GI | 262395264 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAAAG CCATCAGTAT GGACGTGCTG CTTTCCCCTT GGGTGGATTG CCCCAGCTTA
TCGTCCGTTC TTGTTTCTGA ATTGGAGCTC GACAGCCGAA GAGTTCAGCC TGGAACCACG
TTTGTTGCGG TGATTGGCCA TGTTGTGGAT GGGCGTAATT TCATTGCTTC TGCCATTGAG
CAAGGCGCCA ATGCGGTTCT AGCGCAAGCC TGTGAGGTAA AAGCACACGG CACGGTGGAA
ATCATCGATG ACGTTCCCGT TATTTACCTC GATACGTTGG ATCAACGTTT ATCTGCAATC
GCTGGAAAGC TCTATGCTTA CCCAGATATG GATTTGATTG GTGTCACCGG CACCAACGGC
AAAACCACCA TTACTCAGCT AATTGCACAA TGGCTAGAGC TACTTGGCCA CAAAGCGGCA
GTGATGGGCA CGACGGGAAA TGGTTTTCTC GACAATTTAC AGCAAGCCGC GAATACAACA
GGGAATGCTG TAGAAATTCA GAAAACGCTC TCCTCTCTCG CAAATCAACA CGCCACATAC
ACCGCGCTAG AAGTCTCTTC TCATGGCTTA ACGCAAGGCC GTGTCAAGGC GTTGTCGTTT
GCGGCGGGTG TGTTTACTAA TCTAAGTCGT GATCACCTAG ATTATCATGG CACGATGGAA
GAGTACGCCA ATGCAAAGCT GGAGTTGTTT ACGCAACATC AATGTGAACG TGCCATTATC
AATGTCGATG ATGAGGTCGG TCATGCATGG GCGACGCAGT TAAGCAATGC GATTGCGGTG
TCACTCAAAC CGAACACTGA GTTTGAAAGC GCAATTTGGG CGACAGATGT CCGTTACGCG
GAGTCGGGGA TTACTATCCA ATTCGATGGT AAATTTGGCT CAGGTCAATT GCACGCGCCA
CTGATTGGTG AGTTTAACGC AACCAACTTA ATGCTCGCTT TTGCGACCTT ATTAAGCTTG
GGTAAGGATA AACAAGCGTT ACTCGAAACC GCAGGTCAGT TACAACCTGT ACTCGGCCGA
ATGGAGTTAT TCCAGACAGA GGACCGTGCC AAAGTCGTGG TCGATTATGC CCATACTCCT
GATGCACTAG AAAAAGCGCT GCAAGCTTTA CGAGTTCACT GTGAGGGGCA GCTGTGGGCT
ATTTTTGGTT GCGGAGGCGA TCGCGATGCA GGTAAGCGCC CAATGATGGC GGAAATTGCA
GAGCGTCTAG GCGACAGAGT GGTGTTGACT GACGATAACC CACGCAGTGA AGATCCGGTT
CAAATTGTAA AAGACATGTT ATCCGGGCTG TCAAAACCTG CCGAAGCGAT TGTGCAGCAT
GATCGTTTCA AAGCACTGTC TTATGCGGTT GAGAATGCTT CGCCAAAAGA CATCATCTTG
TTAGCGGGTA AGGGCCACGA AGATTATCAA ATTCGGAATG GCGAAACGAT TCATTACTCC
GACCGTGAGT CTGCTATGCA GCTTTTAGGA TTGTCCTTAT GA
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| Protein sequence | MTKAISMDVL LSPWVDCPSL SSVLVSELEL DSRRVQPGTT FVAVIGHVVD GRNFIASAIE
QGANAVLAQA CEVKAHGTVE IIDDVPVIYL DTLDQRLSAI AGKLYAYPDM DLIGVTGTNG
KTTITQLIAQ WLELLGHKAA VMGTTGNGFL DNLQQAANTT GNAVEIQKTL SSLANQHATY
TALEVSSHGL TQGRVKALSF AAGVFTNLSR DHLDYHGTME EYANAKLELF TQHQCERAII
NVDDEVGHAW ATQLSNAIAV SLKPNTEFES AIWATDVRYA ESGITIQFDG KFGSGQLHAP
LIGEFNATNL MLAFATLLSL GKDKQALLET AGQLQPVLGR MELFQTEDRA KVVVDYAHTP
DALEKALQAL RVHCEGQLWA IFGCGGDRDA GKRPMMAEIA ERLGDRVVLT DDNPRSEDPV
QIVKDMLSGL SKPAEAIVQH DRFKALSYAV ENASPKDIIL LAGKGHEDYQ IRNGETIHYS
DRESAMQLLG LSL
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