| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004492 |
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| Symbol | |
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| ID | 8558260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 3216104 |
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| End bp | 3217417 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646407621 |
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| Product | UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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| Protein accession | YP_003287115 |
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| Protein GI | 262395261 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACGTT GGCAAAACAT ACATAGTGTT GTCGTCGTAG GGCTCGGTAT TACCGGGCTC
TCTGTCGTTA AACACCTAAG AAAAAATCAG CCACAGCTTG TGGTCAAAGT CATTGATACT
CGCGTAAACC CTCCGGGTGC AGAGCGTTTG CCGGAAGATG TTCAACTGCA TAGTGGTGGT
TGGAATACAG ACTGGCTTTC TGACGCTGAT CTTATCGTGA CCAACCCTGG TATTGCGCTA
GCGACACCAG AGATCCAAGC CGTATTAGCA AAAGGCACGA CAGTAGTTGG TGATATTGAG
TTATTCGCCT GGGCGGTGCA GAAACCAGTG ATTGCGATTA CGGGCTCAAA CGGTAAGAGC
ACAGTCACCG ACCTCACAGG TGTGATGGTT AAGGCTGCAG GTTTGGATGT GGGCGTTGGT
GGTAACATTG GTGTTCCTGC ACTGGATTTG TTAGAACAAG ACGCAGACCT GTATGTGCTT
GAACTTTCGA GCTTCCAGTT AGAAACGACG TCAAGCTTAA AGCTCAAAGC CGCTGCGTTT
CTGAATCTTT CTGAAGATCA TATGGACCGT TATCAAGGCA TGTCTGACTA TCGACAAGCT
AAGTTGCGTA TTTTTGACCA CGCTGCTCTT GCGGTAGTGA ACCGTGATGA TCAAGAAACC
TTCCCAGATG CAGAGATGCC ATTGGTGACA TTTGGCAGCG ACAATCAGGA CTTTGGTCTC
GAGGTGGATG GCAACCGTAC TTGGCTGCTC GATCACGGTC AACGAGTCGT CGCAAGTGAT
GAGCTTAAGT TGGTTGGTAA ACACAACTTA TCCAATGCAT TGGTCGTTTT AGCGCTCTTA
AAGGCTGCGG GCGTTGATTA TCACAACGCA TTGAATGCAC TTAAAAATTA CACGGGACTG
ACACACCGAT GCCAGGTGGT TGCGGATAAT CAAGGCGTAA AATGGGTGAA TGATTCTAAA
GCAACTAATA TTGCGAGCAC TATGGCTGCG CTATCTGGTT TGGAGTCGAC AGGTAAGCTC
TACTTACTCG TTGGTGGTGT TGGCAAAGGT GCTGACTTCT CGCCATTAAA ACCGATCTTC
GCGACGCTTA ACTTGCAACT GTGCTGCTTT GGCGCTGATG GCGATGACTT TATGCCACTG
CATGAATCTG CAATACGTTT CGACACCATG GAAGATGTGA TTCAACAAGT ATCTTCGCAG
TTAAAACCAG GTGATATGGT GATGCTGTCT CCTGCATGTG CTAGCTTTGA TCAATTCGAC
AACTTTATGG CAAGAGGTGA TGCTTTCGCT GCTCTTGCTC AGAAATATGC ATAA
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| Protein sequence | MERWQNIHSV VVVGLGITGL SVVKHLRKNQ PQLVVKVIDT RVNPPGAERL PEDVQLHSGG
WNTDWLSDAD LIVTNPGIAL ATPEIQAVLA KGTTVVGDIE LFAWAVQKPV IAITGSNGKS
TVTDLTGVMV KAAGLDVGVG GNIGVPALDL LEQDADLYVL ELSSFQLETT SSLKLKAAAF
LNLSEDHMDR YQGMSDYRQA KLRIFDHAAL AVVNRDDQET FPDAEMPLVT FGSDNQDFGL
EVDGNRTWLL DHGQRVVASD ELKLVGKHNL SNALVVLALL KAAGVDYHNA LNALKNYTGL
THRCQVVADN QGVKWVNDSK ATNIASTMAA LSGLESTGKL YLLVGGVGKG ADFSPLKPIF
ATLNLQLCCF GADGDDFMPL HESAIRFDTM EDVIQQVSSQ LKPGDMVMLS PACASFDQFD
NFMARGDAFA ALAQKYA
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